Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Agrobacterium fabrum C58 | 1.0 | Atu1074 | | NAD/NADP dependent oxidoreductase | 1.0 | Atu0768 | | cytochrome-c oxidase chain I | 0.44 | 14 |
Rhizobium sp. OAE497 | 0.83 | ABIE40_RS06265 | | SDR family NAD(P)-dependent oxidoreductase | 0.84 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.62 | 46 |
Sinorhizobium meliloti 1021 | 0.81 | SMc00553 | | oxidoreductase | 0.83 | SMc00010 | | cytochrome C oxidase polypeptide I transmembrane protein | — | — |
Bosea sp. OAE506 | 0.54 | ABIE41_RS17815 | | SDR family NAD(P)-dependent oxidoreductase | 0.69 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.38 | 26 |
Rhodopseudomonas palustris CGA009 | 0.51 | TX73_015995 | | SDR family NAD(P)-dependent oxidoreductase | 0.71 | TX73_004290 | | cytochrome c oxidase subunit I | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS03730 | | SDR family NAD(P)-dependent oxidoreductase | 0.68 | A4249_RS00110 | | cytochrome c oxidase subunit I | low | > 48 |
Caulobacter crescentus NA1000 | 0.48 | CCNA_01728 | | short chain dehydrogenase | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.48 | CCNA_01728 | | short chain dehydrogenase | 0.68 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | low | > 67 |
Azospirillum brasilense Sp245 | 0.47 | AZOBR_RS08305 | | oxidoreductase | 0.65 | AZOBR_RS10585 | | cytochrome C oxidase subunit I | low | > 97 |
Azospirillum sp. SherDot2 | 0.44 | MPMX19_00907 | | putative oxidoreductase YciK | 0.65 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | low | > 112 |
Magnetospirillum magneticum AMB-1 | 0.42 | AMB_RS10540 | | KR domain-containing protein | 0.66 | AMB_RS10960 | | cytochrome c oxidase subunit I | low | > 64 |
Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_3625 | | Short-chain dehydrogenases of various substrate specificities | 0.65 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.44 | 16 |
Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_2135 | | short-chain dehydrogenase/reductase SDR (RefSeq) | 0.59 | Dshi_2383 | | Cytochrome c oxidase subunit I type (RefSeq) | — | — |
Kangiella aquimarina DSM 16071 | 0.34 | B158DRAFT_2314 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.48 | B158DRAFT_0136 | | cytochrome c oxidase, subunit I | low | > 40 |
Shewanella loihica PV-4 | 0.31 | Shew_2409 | | short chain dehydrogenase (RefSeq) | 0.49 | Shew_0124 | | cytochrome-c oxidase (RefSeq) | low | > 60 |
Shewanella amazonensis SB2B | 0.30 | Sama_2121 | | short chain dehydrogenase (RefSeq) | 0.49 | Sama_3484 | | cytochrome-c oxidase (RefSeq) | low | > 62 |
Marinobacter adhaerens HP15 | 0.30 | HP15_1225 | | oxidoreductase, short chain dehydrogenase/reductase family | 0.51 | HP15_3772 | | cytochrome c oxidase, subunit I | low | > 73 |
Pseudomonas stutzeri RCH2 | 0.29 | Psest_2000 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.50 | Psest_4327 | | cytochrome c oxidase, subunit I | low | > 67 |
Pseudomonas putida KT2440 | 0.29 | PP_1763 | | putative oxidoreductase | 0.49 | PP_0104 | | Cytochrome c oxidase subunit 1 | low | > 96 |
Alteromonas macleodii MIT1002 | 0.29 | MIT1002_01965 | | putative oxidoreductase YciK | 0.48 | MIT1002_04034 | | Cytochrome c oxidase subunit 1 | low | > 70 |
Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_02105 | | 3-oxoacyl-ACP reductase | 0.50 | AO353_10835 | | cytochrome oxidase subunit I | — | — |
Shewanella oneidensis MR-1 | 0.29 | SO2935 | | oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) | 0.49 | SO4607 | | cytochrome c oxidase, subunit I (NCBI ptt file) | low | > 76 |
Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_2169 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.50 | PfGW456L13_614 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_358 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.50 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | low | > 87 |
Pseudomonas sp. S08-1 | 0.28 | OH686_20835 | | Oxidoreductase, short-chain dehydrogenase/reductase family | 0.50 | OH686_12320 | | cytochrome c oxidase, subunit I | low | > 80 |
Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS08060 | | YciK family oxidoreductase | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS08060 | | YciK family oxidoreductase | 0.51 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.48 | 48 |
Pseudomonas simiae WCS417 | 0.28 | PS417_08090 | | 3-oxoacyl-ACP reductase | 0.51 | PS417_00305 | | cytochrome oxidase subunit I | low | > 88 |
Shewanella sp. ANA-3 | 0.28 | Shewana3_1528 | | short chain dehydrogenase (RefSeq) | 0.49 | Shewana3_3992 | | cytochrome c oxidase, subunit I (RefSeq) | low | > 73 |
Pseudomonas sp. RS175 | 0.27 | PFR28_00899 | | putative oxidoreductase YciK | 0.50 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_03500 | | 3-oxoacyl-ACP reductase | 0.50 | AO356_11165 | | cytochrome oxidase subunit I | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_2527 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.50 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | low | > 103 |
Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c10780 | | putative short chain dehydrogenase | 0.59 | PGA1_c06710 | | cytochrome c oxidase subunit 1-beta | — | — |
Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS13545 | | SDR family NAD(P)-dependent oxidoreductase | 0.52 | LRK55_RS06860 | | cytochrome c oxidase subunit I | low | > 63 |
Rhodanobacter sp. FW510-T8 | 0.19 | OKGIIK_03065 | yqjQ | Short-chain dehydrogenase | 0.52 | OKGIIK_16520 | ctaD | cytochrome c oxidase subunit I | low | > 52 |
Not shown: 30 genomes with orthologs for Atu1074 only; 28 genomes with orthologs for Atu0768 only