Conservation of cofitness between Atu1074 and Atu0768 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1074 NAD/NADP dependent oxidoreductase 1.0 Atu0768 cytochrome-c oxidase chain I 0.44 14
Rhizobium sp. OAE497 0.83 ABIE40_RS06265 SDR family NAD(P)-dependent oxidoreductase 0.84 ABIE40_RS04065 cytochrome c oxidase subunit I 0.62 46
Sinorhizobium meliloti 1021 0.81 SMc00553 oxidoreductase 0.83 SMc00010 cytochrome C oxidase polypeptide I transmembrane protein
Bosea sp. OAE506 0.54 ABIE41_RS17815 SDR family NAD(P)-dependent oxidoreductase 0.69 ABIE41_RS22950 cytochrome c oxidase subunit I 0.38 26
Rhodopseudomonas palustris CGA009 0.51 TX73_015995 SDR family NAD(P)-dependent oxidoreductase 0.71 TX73_004290 cytochrome c oxidase subunit I
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS03730 SDR family NAD(P)-dependent oxidoreductase 0.68 A4249_RS00110 cytochrome c oxidase subunit I low > 48
Caulobacter crescentus NA1000 0.48 CCNA_01728 short chain dehydrogenase 0.68 CCNA_03517 cytochrome c oxidase polypeptide I coxA low > 66
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01728 short chain dehydrogenase 0.68 CCNA_03517 cytochrome c oxidase polypeptide I coxA low > 67
Azospirillum brasilense Sp245 0.47 AZOBR_RS08305 oxidoreductase 0.65 AZOBR_RS10585 cytochrome C oxidase subunit I low > 97
Azospirillum sp. SherDot2 0.44 MPMX19_00907 putative oxidoreductase YciK 0.65 MPMX19_00885 Cytochrome c oxidase subunit 1 low > 112
Magnetospirillum magneticum AMB-1 0.42 AMB_RS10540 KR domain-containing protein 0.66 AMB_RS10960 cytochrome c oxidase subunit I low > 64
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3625 Short-chain dehydrogenases of various substrate specificities 0.65 Ga0059261_2008 cytochrome c oxidase, subunit I 0.44 16
Dinoroseobacter shibae DFL-12 0.35 Dshi_2135 short-chain dehydrogenase/reductase SDR (RefSeq) 0.59 Dshi_2383 Cytochrome c oxidase subunit I type (RefSeq)
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2314 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.48 B158DRAFT_0136 cytochrome c oxidase, subunit I low > 40
Shewanella loihica PV-4 0.31 Shew_2409 short chain dehydrogenase (RefSeq) 0.49 Shew_0124 cytochrome-c oxidase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.30 Sama_2121 short chain dehydrogenase (RefSeq) 0.49 Sama_3484 cytochrome-c oxidase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.30 HP15_1225 oxidoreductase, short chain dehydrogenase/reductase family 0.51 HP15_3772 cytochrome c oxidase, subunit I low > 73
Pseudomonas stutzeri RCH2 0.29 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.50 Psest_4327 cytochrome c oxidase, subunit I low > 67
Pseudomonas putida KT2440 0.29 PP_1763 putative oxidoreductase 0.49 PP_0104 Cytochrome c oxidase subunit 1 low > 96
Alteromonas macleodii MIT1002 0.29 MIT1002_01965 putative oxidoreductase YciK 0.48 MIT1002_04034 Cytochrome c oxidase subunit 1 low > 70
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_02105 3-oxoacyl-ACP reductase 0.50 AO353_10835 cytochrome oxidase subunit I
Shewanella oneidensis MR-1 0.29 SO2935 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) 0.49 SO4607 cytochrome c oxidase, subunit I (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2169 Oxidoreductase, short chain dehydrogenase/reductase family 0.50 PfGW456L13_614 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_358 Oxidoreductase, short chain dehydrogenase/reductase family 0.50 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas sp. S08-1 0.28 OH686_20835 Oxidoreductase, short-chain dehydrogenase/reductase family 0.50 OH686_12320 cytochrome c oxidase, subunit I low > 80
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS08060 YciK family oxidoreductase 0.51 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS08060 YciK family oxidoreductase 0.51 PFLU_RS00295 cytochrome c oxidase subunit I 0.48 48
Pseudomonas simiae WCS417 0.28 PS417_08090 3-oxoacyl-ACP reductase 0.51 PS417_00305 cytochrome oxidase subunit I low > 88
Shewanella sp. ANA-3 0.28 Shewana3_1528 short chain dehydrogenase (RefSeq) 0.49 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) low > 73
Pseudomonas sp. RS175 0.27 PFR28_00899 putative oxidoreductase YciK 0.50 PFR28_04690 Cytochrome c oxidase subunit 1
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_03500 3-oxoacyl-ACP reductase 0.50 AO356_11165 cytochrome oxidase subunit I low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2527 Oxidoreductase, short chain dehydrogenase/reductase family 0.50 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 103
Phaeobacter inhibens DSM 17395 0.27 PGA1_c10780 putative short chain dehydrogenase 0.59 PGA1_c06710 cytochrome c oxidase subunit 1-beta
Rhodanobacter denitrificans MT42 0.19 LRK55_RS13545 SDR family NAD(P)-dependent oxidoreductase 0.52 LRK55_RS06860 cytochrome c oxidase subunit I low > 63
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_03065 yqjQ Short-chain dehydrogenase 0.52 OKGIIK_16520 ctaD cytochrome c oxidase subunit I low > 52

Not shown: 30 genomes with orthologs for Atu1074 only; 28 genomes with orthologs for Atu0768 only