Conservation of cofitness between AO353_07550 and AO353_04430 in Pseudomonas fluorescens FW300-N2E3

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_07550 chloramphenical resistance permease RarD 1.0 AO353_04430 DNA mismatch repair protein MutT 0.25 18
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2480 Protein rarD 0.97 Pf1N1B4_883 Hypothetical nudix hydrolase YeaB low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1142 Protein rarD 0.98 PfGW456L13_4826 Hypothetical nudix hydrolase YeaB low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4754 Protein rarD 0.94 Pf6N2E2_5437 Hypothetical nudix hydrolase YeaB low > 103
Pseudomonas sp. RS175 0.93 PFR28_04108 Protein RarD 0.93 PFR28_03508 putative Nudix hydrolase NudL low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_14110 Putative D-serine transporter (from data) 0.95 AO356_17570 DNA mismatch repair protein MutT low > 104
Pseudomonas simiae WCS417 0.91 PS417_26030 chloramphenical resistance permease RarD 0.94 PS417_22965 DNA mismatch repair protein MutT low > 88
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS27675 EamA family transporter RarD 0.94 PFLU_RS24625 CoA pyrophosphatase low > 109
Pseudomonas fluorescens SBW25 0.91 PFLU_RS27675 EamA family transporter RarD 0.94 PFLU_RS24625 CoA pyrophosphatase low > 109
Pseudomonas putida KT2440 0.90 PP_0358 conserved membrane protein of unknown function 0.88 PP_1453 putative NUDIX hydrolase with low 3-phosphohydroxypyruvate phosphatase activity low > 96
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4698 RarD protein 0.86 Psyr_1273 NUDIX hydrolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4698 RarD protein 0.86 Psyr_1273 NUDIX hydrolase low > 86
Pseudomonas sp. S08-1 0.72 OH686_10385 Uncharacterized inner membrane protein RarD 0.77 OH686_17685 Uncharacterized Nudix hydrolase NudL low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0356 rarD protein 0.79 Psest_3140 NTP pyrophosphohydrolases including oxidative damage repair enzymes low > 67
Escherichia coli ECRC62 0.48 BNILDI_05025 rarD EamA family transporter RarD 0.28 BNILDI_15860 nudL CoA pyrophosphatase low > 75
Escherichia coli ECRC100 0.48 OKFHMN_14375 rarD EamA family transporter RarD 0.28 OKFHMN_26555 nudL CoA pyrophosphatase low > 80
Escherichia coli ECRC98 0.48 JDDGAC_18000 rarD EamA family transporter RarD 0.28 JDDGAC_01130 nudL CoA pyrophosphatase low > 86
Escherichia coli ECOR27 0.48 NOLOHH_06505 rarD EamA family transporter RarD 0.28 NOLOHH_17075 nudL CoA pyrophosphatase low > 75
Escherichia coli ECRC99 0.48 KEDOAH_13775 rarD EamA family transporter RarD 0.28 KEDOAH_01555 nudL CoA pyrophosphatase — —
Escherichia coli ECRC102 0.48 NIAGMN_12130 rarD EamA family transporter RarD 0.28 NIAGMN_01510 nudL CoA pyrophosphatase — —
Escherichia fergusonii Becca 0.48 EFB2_04818 Protein RarD 0.28 EFB2_02187 putative Nudix hydrolase NudL low > 86
Escherichia coli ECRC101 0.48 MCAODC_04880 rarD EamA family transporter RarD 0.28 MCAODC_18855 nudL CoA pyrophosphatase low > 87
Escherichia coli BW25113 0.48 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.27 b1813 yeaB predicted NUDIX hydrolase (NCBI) low > 76
Escherichia coli ECOR38 0.48 HEPCGN_13075 rarD EamA family transporter RarD 0.27 HEPCGN_04945 nudL CoA pyrophosphatase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04232 Protein RarD 0.28 OHPLBJKB_01918 putative Nudix hydrolase NudL 0.77 72
Escherichia coli BL21 0.48 ECD_03698 putative chloramphenical resistance permease 0.28 ECD_01783 putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS21920 EamA family transporter RarD 0.28 ECOLIN_RS10085 CoA pyrophosphatase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF245 Protein rarD 0.33 GFF2827 Hypothetical nudix hydrolase YeaB low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_04461 Protein RarD 0.33 MPMX20_02718 putative Nudix hydrolase NudL low > 85
Shewanella oneidensis MR-1 0.46 SO4243 rarD rarD protein (NCBI ptt file) 0.26 SO2220 MutT/nudix family protein (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4484 rarD protein 0.33 EX28DRAFT_0746 NUDIX domain low > 76
Shewanella sp. ANA-3 0.46 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.26 Shewana3_2304 NUDIX hydrolase (RefSeq) — —
Serratia liquefaciens MT49 0.46 IAI46_00755 EamA family transporter RarD 0.31 IAI46_14790 CoA pyrophosphatase low > 86
Shewanella loihica PV-4 0.46 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.25 Shew_1902 NUDIX hydrolase (RefSeq) — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS01380 EamA family transporter RarD 0.29 HER17_RS11310 CoA pyrophosphatase low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS19865 EamA family transporter RarD 0.30 DDA3937_RS11260 CoA pyrophosphatase low > 74
Shewanella amazonensis SB2B 0.45 Sama_0332 rarD protein (RefSeq) 0.27 Sama_1686 MutT/nudix family protein (RefSeq) low > 62
Klebsiella michiganensis M5al 0.44 BWI76_RS01230 chloramphenicol resistance permease RarD 0.32 BWI76_RS17870 coenzyme A pyrophosphatase low > 92
Rahnella sp. WP5 0.44 EX31_RS15195 EamA family transporter RarD 0.27 EX31_RS24720 CoA pyrophosphatase low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01040 protein RarD 0.22 CSW01_06575 CoA pyrophosphatase low > 62
Dickeya dianthicola ME23 0.43 DZA65_RS21060 EamA family transporter RarD 0.28 DZA65_RS11640 CoA pyrophosphatase low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS20020 EamA family transporter RarD 0.30 HGI48_RS11295 CoA pyrophosphatase low > 71
Ralstonia solanacearum GMI1000 0.40 RS_RS02855 EamA family transporter RarD 0.28 RS_RS04660 CoA pyrophosphatase low > 80
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0490 rarD protein 0.30 B158DRAFT_1340 NTP pyrophosphohydrolases including oxidative damage repair enzymes low > 40
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_3478 rarD protein 0.32 Ga0059261_1519 NUDIX domain low > 68
Marinobacter adhaerens HP15 0.37 HP15_2670 RarD protein, DMT superfamily transporter 0.49 HP15_1242 MutT/nudix family protein low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_15360 permease 0.20 CA264_01710 coenzyme A pyrophosphatase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1172 Chloramphenicol-sensitive protein rarD 0.29 GFF5736 Hypothetical nudix hydrolase YeaB low > 90

Not shown: 27 genomes with orthologs for AO353_07550 only; 4 genomes with orthologs for AO353_04430 only