Conservation of cofitness between AO353_26720 and AO353_00785 in Pseudomonas fluorescens FW300-N2E3

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_26720 LysR family transcriptional regulator 1.0 AO353_00785 nitrate transporter 0.30 15
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS27430 LysR family transcriptional regulator 0.40 BPHYT_RS28170 nitrate ABC transporter substrate-binding protein 0.32 35
Pseudomonas simiae WCS417 0.72 PS417_07220 LysR family transcriptional regulator 0.86 PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) low > 88
Pseudomonas fluorescens SBW25 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.88 PFLU_RS22570 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.88 PFLU_RS22570 ABC transporter substrate-binding protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3165 transcriptional regulator, LysR family 0.76 Psyr_2105 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3165 transcriptional regulator, LysR family 0.76 Psyr_2105 conserved hypothetical protein low > 86
Paraburkholderia graminis OAS925 0.68 ABIE53_005445 DNA-binding transcriptional LysR family regulator 0.42 ABIE53_005718 ABC-type nitrate/sulfonate/bicarbonate transport system substrate-binding protein low > 113
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS08345 LysR family transcriptional regulator 0.57 ABZR87_RS06900 CmpA/NrtA family ABC transporter substrate-binding protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_03335 transcriptional regulator, LysR family 0.41 H281DRAFT_01219 nitrate/nitrite transport system substrate-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS11315 LysR family transcriptional regulator 0.42 QEN71_RS12555 CmpA/NrtA family ABC transporter substrate-binding protein low > 153
Pantoea sp. MT58 0.59 IAI47_10140 LysR family transcriptional regulator 0.56 IAI47_11185 ABC transporter substrate-binding protein low > 76
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4371 LysR family transcriptional regulator YbhD 0.52 Ac3H11_3220 Nitrate ABC transporter, nitrate-binding protein low > 79
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0581 Transcriptional regulator 0.51 EX28DRAFT_0842 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components low > 76
Enterobacter sp. TBS_079 0.57 MPMX20_02971 HTH-type transcriptional regulator CynR 0.50 MPMX20_02624 Nitrate/nitrite binding protein NrtA low > 85
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS28580 LysR family transcriptional regulator 0.55 RR42_RS01955 nitrate transporter low > 128
Pseudomonas putida KT2440 0.51 PP_2054 putative DNA-binding transcriptional regulator 0.77 PP_2094 putative Nitrate-binding protein NasS low > 96
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_28895 LysR family transcriptional regulator 0.89 AO356_02750 nitrate transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4462 LysR family transcriptional regulator YbhD 0.93 Pf1N1B4_3841 Nitrate ABC transporter, nitrate-binding protein low > 87
Pseudomonas sp. RS175 0.51 PFR28_01942 HTH-type transcriptional regulator CynR 0.88 PFR28_01053 Nitrate/nitrite binding protein NrtA low > 88
Dickeya dadantii 3937 0.47 DDA3937_RS07805 LysR family transcriptional regulator 0.52 DDA3937_RS14105 ABC transporter substrate-binding protein low > 74
Azospirillum brasilense Sp245 0.47 AZOBR_RS28100 LysR family transcriptional regulator 0.24 AZOBR_RS18560 ABC transporter for nitrate, periplasmic substrate-binding component (from data) low > 97
Azospirillum sp. SherDot2 0.47 MPMX19_03557 HTH-type transcriptional regulator CynR 0.23 MPMX19_05925 Nitrate/nitrite binding protein NrtA low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2179 LysR family transcriptional regulator YbhD 0.52 GFF3671 Nitrate ABC transporter, nitrate-binding protein low > 90
Agrobacterium fabrum C58 0.43 Atu4264 LysR family transcriptional regulator 0.27 Atu3905 nitrate ABC transporter substrate-binding protein low > 89
Klebsiella michiganensis M5al 0.41 BWI76_RS04365 LysR family transcriptional regulator 0.54 BWI76_RS17380 nitrate transporter component low > 92
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS07340 LysR family transcriptional regulator 0.54 HSERO_RS06055 nitrate transporter low > 78
Variovorax sp. SCN45 0.32 GFF2416 Transcriptional regulator YbhD, LysR family 0.53 GFF4737 Nitrate ABC transporter, substrate-binding protein low > 127
Bosea sp. OAE506 0.32 ABIE41_RS16550 LysR family transcriptional regulator 0.27 ABIE41_RS21330 CmpA/NrtA family ABC transporter substrate-binding protein low > 77
Ralstonia solanacearum UW163 0.28 UW163_RS08525 LysR family transcriptional regulator 0.57 UW163_RS02545 nitrate ABC transporter substrate-binding protein — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS05100 LysR family transcriptional regulator 0.57 RALBFv3_RS11035 nitrate ABC transporter substrate-binding protein low > 76
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12195 LysR family transcriptional regulator 0.57 RPSI07_RS22270 nitrate ABC transporter substrate-binding protein low > 81
Ralstonia solanacearum GMI1000 0.28 RS_RS12720 LysR family transcriptional regulator 0.56 RS_RS01875 nitrate ABC transporter substrate-binding protein low > 80
Rahnella sp. WP5 0.27 EX31_RS20145 LysR family transcriptional regulator 0.53 EX31_RS09125 ABC transporter substrate-binding protein low > 89
Dickeya dianthicola 67-19 0.25 HGI48_RS00115 LysR family transcriptional regulator 0.52 HGI48_RS14105 ABC transporter substrate-binding protein low > 71
Dickeya dianthicola ME23 0.25 DZA65_RS00130 LysR family transcriptional regulator 0.52 DZA65_RS14765 ABC transporter substrate-binding protein low > 75

Not shown: 18 genomes with orthologs for AO353_26720 only; 17 genomes with orthologs for AO353_00785 only