Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS08765 | | TolC family outer membrane protein | 1.0 | ABZR87_RS00765 | | N-acetylmuramoyl-L-alanine amidase | 0.60 | 7 |
Ralstonia solanacearum PSI07 | 0.83 | RPSI07_RS20545 | | channel protein TolC | 0.84 | RPSI07_RS12185 | | N-acetylmuramoyl-L-alanine amidase | low | > 81 |
Ralstonia solanacearum UW163 | 0.82 | UW163_RS00850 | | channel protein TolC | 0.83 | UW163_RS08515 | | N-acetylmuramoyl-L-alanine amidase | — | — |
Ralstonia solanacearum GMI1000 | 0.82 | RS_RS03495 | | channel protein TolC | 0.84 | RS_RS12730 | | N-acetylmuramoyl-L-alanine amidase | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.82 | RALBFv3_RS12715 | | channel protein TolC | 0.83 | RALBFv3_RS05110 | | N-acetylmuramoyl-L-alanine amidase | low | > 76 |
Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS15670 | | channel protein TolC | 0.65 | RR42_RS03415 | | N-acetylmuramoyl-L-alanine amidase | low | > 128 |
Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_00100 | | outer membrane protein | 0.52 | H281DRAFT_04130 | | N-acetylmuramoyl-L-alanine amidase | — | — |
Dechlorosoma suillum PS | 0.38 | Dsui_0405 | | type I secretion outer membrane protein, TolC family | 0.48 | Dsui_3500 | | N-acetylmuramoyl-L-alanine amidase | — | — |
Variovorax sp. OAS795 | 0.32 | ABID97_RS21375 | | TolC family outer membrane protein | 0.17 | ABID97_RS20295 | | N-acetylmuramoyl-L-alanine amidase | low | > 91 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF5765 | | Type I secretion outer membrane protein, TolC precursor | 0.47 | GFF5476 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | low | > 90 |
Variovorax sp. SCN45 | 0.30 | GFF6530 | | Type I secretion outer membrane protein, TolC family | 0.45 | GFF4803 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | low | > 127 |
Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | 0.32 | Ac3H11_308 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_08815 | | channel protein TolC | 0.24 | AO356_08670 | | N-acetylmuramoyl-L-alanine amidase | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | 0.24 | Pf6N2E2_3617 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | low | > 103 |
Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | 0.24 | Pf1N1B4_1415 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.29 | Psyr_0569 | | N-acetylmuramoyl-L-alanine amidase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.29 | Psyr_0569 | | N-acetylmuramoyl-L-alanine amidase | low | > 86 |
Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | 0.24 | PfGW456L13_157 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | low | > 87 |
Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.24 | PFLU_RS02555 | | AMIN domain-containing protein | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.24 | PFLU_RS02555 | | AMIN domain-containing protein | low | > 109 |
Pseudomonas putida KT2440 | 0.23 | PP_4923 | | Outer membrane efflux protein | 0.26 | PP_4897 | | N-acetylmuramoyl-L-alanine amidase | low | > 96 |
Lysobacter sp. OAE881 | 0.23 | ABIE51_RS17615 | | TolC family outer membrane protein | 0.23 | ABIE51_RS08060 | | N-acetylmuramoyl-L-alanine amidase | — | — |
Pseudomonas sp. S08-1 | 0.23 | OH686_15890 | | Outer membrane channel TolC (OpmH) | 0.24 | OH686_09485 | | N-acetylmuramoyl-L-alanine amidase | low | > 80 |
Xanthomonas campestris pv. campestris strain 8004 | 0.22 | Xcc-8004.1042.1 | | Type I secretion outer membrane protein, TolC precursor | 0.23 | Xcc-8004.2255.1 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | — | — |
Escherichia coli ECOR27 | 0.21 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | 0.37 | NOLOHH_11950 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 75 |
Escherichia coli ECOR38 | 0.21 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | 0.37 | HEPCGN_19320 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 87 |
Escherichia coli ECRC62 | 0.21 | BNILDI_00905 | tolC | outer membrane channel protein TolC | 0.37 | BNILDI_10430 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 75 |
Escherichia coli BW25113 | 0.21 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.37 | b2817 | b2817 | putative amidase (VIMSS) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.21 | OHPLBJKB_00668 | | Outer membrane protein TolC | 0.37 | OHPLBJKB_00913 | | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 73 |
Escherichia coli BL21 | 0.21 | ECD_02907 | | transport channel | 0.37 | ECD_02665 | | N-acetylmuramoyl-L-alanine amidase | low | > 61 |
Pantoea sp. MT58 | 0.21 | IAI47_03135 | | outer membrane channel protein TolC | 0.34 | IAI47_03980 | | N-acetylmuramoyl-L-alanine amidase | low | > 76 |
Escherichia coli Nissle 1917 | 0.21 | ECOLIN_RS17515 | | outer membrane channel protein TolC | 0.37 | ECOLIN_RS15815 | | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 55 |
Escherichia coli ECRC99 | 0.21 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | 0.37 | KEDOAH_08065 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | — | — |
Escherichia coli ECRC100 | 0.21 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | 0.37 | OKFHMN_20065 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 80 |
Escherichia coli ECRC102 | 0.21 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | 0.37 | NIAGMN_17835 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | — | — |
Escherichia coli ECRC101 | 0.21 | MCAODC_09320 | tolC | outer membrane channel protein TolC | 0.37 | MCAODC_10590 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 87 |
Escherichia coli ECRC98 | 0.21 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | 0.37 | JDDGAC_23730 | amiC | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 86 |
Escherichia fergusonii Becca | 0.21 | EFB2_00773 | | Outer membrane protein TolC | 0.37 | EFB2_01067 | | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | 0.37 | GFF1298 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | low | > 78 |
Klebsiella michiganensis M5al | 0.20 | BWI76_RS24400 | | outer membrane channel protein TolC | 0.35 | BWI76_RS23215 | | N-acetylmuramoyl-L-alanine amidase | low | > 92 |
Enterobacter sp. TBS_079 | 0.19 | MPMX20_03882 | | Outer membrane protein TolC | 0.37 | MPMX20_03680 | | N-acetylmuramoyl-L-alanine amidase AmiC | low | > 85 |
Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | 0.37 | EX28DRAFT_2892 | | N-acetylmuramoyl-L-alanine amidase | low | > 76 |
Serratia liquefaciens MT49 | 0.18 | IAI46_21945 | | outer membrane channel protein TolC | 0.34 | IAI46_20390 | | N-acetylmuramoyl-L-alanine amidase | low | > 86 |
Azospirillum sp. SherDot2 | 0.12 | MPMX19_01309 | | Outer membrane efflux protein BepC | 0.16 | MPMX19_00339 | | hypothetical protein | — | — |
Paraburkholderia graminis OAS925 | 0.07 | ABIE53_004979 | | outer membrane protein | 0.36 | ABIE53_003365 | | N-acetylmuramoyl-L-alanine amidase | low | > 113 |
Not shown: 38 genomes with orthologs for ABZR87_RS08765 only; 5 genomes with orthologs for ABZR87_RS00765 only