Conservation of cofitness between A4249_RS08425 and A4249_RS06785 in Brevundimonas sp. GW460-12-10-14-LB2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS08425 class I SAM-dependent RNA methyltransferase 1.0 A4249_RS06785 endolytic transglycosylase MltG 0.75 1
Caulobacter crescentus NA1000 0.57 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.45 CCNA_01751 aminodeoxychorismate lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.45 CCNA_01751 aminodeoxychorismate lyase low > 67
Bosea sp. OAE506 0.38 ABIE41_RS22255 RNA methyltransferase 0.37 ABIE41_RS17745 endolytic transglycosylase MltG low > 77
Agrobacterium fabrum C58 0.36 Atu0735 RNA methyltransferase 0.33 Atu1099 hypothetical protein low > 89
Dinoroseobacter shibae DFL-12 0.35 Dshi_3492 (Uracil-5)-methyltransferase (RefSeq) 0.32 Dshi_2179 aminodeoxychorismate lyase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c34810 putative RNA methyltransferase 0.32 PGA1_c17880 putative aminodeoxychorismate lyase — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0648 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 0.34 Ga0059261_0361 conserved hypothetical protein, YceG family low > 68
Rhodospirillum rubrum S1H 0.24 Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI) 0.36 Rru_A0419 Aminodeoxychorismate lyase (NCBI) — —
Erwinia tracheiphila SCR3 0.17 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.21 LU632_RS14800 yceG cell division protein YceG low > 74
Acinetobacter radioresistens SK82 0.17 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.23 MPMX26_02164 Endolytic murein transglycosylase low > 36
Pectobacterium carotovorum WPP14 0.17 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 HER17_RS08670 endolytic transglycosylase MltG 0.46 49
Pantoea sp. MT58 0.17 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.23 IAI47_12050 cell division protein YceG low > 76
Escherichia coli ECOR38 0.16 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 HEPCGN_23925 yceG cell division protein YceG low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.21 GFF3379 FIG004453: protein YceG like low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 OHPLBJKB_02569 Endolytic murein transglycosylase low > 73
Escherichia coli BW25113 0.16 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 0.22 b1097 yceG predicted aminodeoxychorismate lyase (NCBI) low > 76
Escherichia coli BL21 0.16 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 0.22 ECD_01093 septation protein, ampicillin sensitivity low > 61
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.24 Psyr_1651 Protein of unknown function DUF175 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.24 Psyr_1651 Protein of unknown function DUF175 low > 86
Escherichia fergusonii Becca 0.16 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 EFB2_02878 Endolytic murein transglycosylase low > 86
Enterobacter asburiae PDN3 0.16 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.22 EX28DRAFT_1832 conserved hypothetical protein, YceG family low > 76
Escherichia coli ECOR27 0.16 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 NOLOHH_21085 yceG cell division protein YceG low > 75
Escherichia coli ECRC99 0.16 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 KEDOAH_24200 yceG cell division protein YceG — —
Escherichia coli ECRC100 0.16 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 OKFHMN_03555 yceG cell division protein YceG low > 80
Shewanella amazonensis SB2B 0.16 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.21 Sama_2044 hypothetical protein (RefSeq) low > 62
Escherichia coli ECRC101 0.16 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 MCAODC_22915 yceG cell division protein YceG low > 87
Escherichia coli ECRC62 0.16 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 BNILDI_19245 yceG cell division protein YceG low > 75
Escherichia coli ECRC98 0.16 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 JDDGAC_07215 yceG cell division protein YceG low > 86
Escherichia coli ECRC102 0.16 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 NIAGMN_24275 yceG cell division protein YceG — —
Pseudomonas stutzeri RCH2 0.15 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.22 Psest_1692 conserved hypothetical protein, YceG family low > 67
Enterobacter sp. TBS_079 0.15 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.22 MPMX20_01777 Endolytic murein transglycosylase low > 85
Klebsiella michiganensis M5al 0.15 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.21 BWI76_RS11110 cell division protein YceG low > 92
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.25 ABZR86_RS06145 endolytic transglycosylase MltG low > 74
Shewanella loihica PV-4 0.14 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.20 Shew_1578 aminodeoxychorismate lyase (RefSeq) — —
Pseudomonas sp. S08-1 0.14 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.23 OH686_22160 Murein endolytic transglycosylase MltG low > 80
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.25 Xcc-8004.3991.1 FIG004453: protein YceG like low > 74
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.23 Pf1N1B4_447 FIG004453: protein YceG like low > 87
Pseudomonas fluorescens FW300-N2E2 0.13 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.23 Pf6N2E2_5956 FIG004453: protein YceG like low > 103
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_19055 23S rRNA methyltransferase 0.24 AO356_20185 aminodeoxychorismate lyase low > 104
Pseudomonas simiae WCS417 0.13 PS417_20155 23S rRNA methyltransferase 0.22 PS417_21420 aminodeoxychorismate lyase low > 88
Lysobacter sp. OAE881 0.12 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.26 ABIE51_RS13920 endolytic transglycosylase MltG low > 62
Pseudomonas sp. RS175 0.12 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.24 PFR28_03006 Endolytic murein transglycosylase low > 88
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.22 PfGW456L13_2109 FIG004453: protein YceG like low > 87
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_02715 23S rRNA methyltransferase 0.24 AO353_01345 aminodeoxychorismate lyase low > 101
Mucilaginibacter yixingensis YX-36 DSM 26809 0.11 ABZR88_RS21250 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.16 ABZR88_RS14775 endolytic transglycosylase MltG low > 71

Not shown: 42 genomes with orthologs for A4249_RS08425 only; 7 genomes with orthologs for A4249_RS06785 only