Conservation of cofitness between Sama_2008 and Sama_2890 in Shewanella amazonensis SB2B

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2008 cystathionine beta-lyase (RefSeq) 1.0 Sama_2890 Sulfate adenylyltransferase (RefSeq) 0.82 19
Shewanella oneidensis MR-1 0.83 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.63 SO3726 cysN sulfate adenylyltransferase, subunit 1 (NCBI ptt file) 0.94 13
Shewanella sp. ANA-3 0.82 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.64 Shewana3_0864 cysN sulfate adenylyltransferase subunit 1 (RefSeq) 0.91 16
Shewanella loihica PV-4 0.82 Shew_1789 cystathionine beta-lyase (RefSeq) 0.59 Shew_1423 sulfate adenylyltransferase, large subunit (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_08400 cystathionine beta-lyase 0.64 CSW01_12955 sulfate adenylyltransferase low > 62
Dickeya dadantii 3937 0.55 DDA3937_RS01815 cystathionine beta-lyase 0.61 DDA3937_RS16920 sulfate adenylyltransferase subunit CysN 0.82 43
Dickeya dianthicola 67-19 0.55 HGI48_RS01710 cystathionine beta-lyase 0.60 HGI48_RS16990 sulfate adenylyltransferase subunit CysN low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS01785 cystathionine beta-lyase 0.60 DZA65_RS18065 sulfate adenylyltransferase subunit CysN 0.75 53
Pectobacterium carotovorum WPP14 0.54 HER17_RS19690 cystathionine beta-lyase 0.61 HER17_RS04290 sulfate adenylyltransferase subunit CysN 0.93 45
Serratia liquefaciens MT49 0.53 IAI46_21725 cystathionine beta-lyase 0.64 IAI46_03720 sulfate adenylyltransferase subunit CysN low > 86
Rahnella sp. WP5 0.52 EX31_RS08025 cystathionine beta-lyase 0.63 EX31_RS07875 sulfate adenylyltransferase subunit CysN low > 89
Escherichia coli Nissle 1917 0.52 ECOLIN_RS17315 cystathionine beta-lyase 0.62 ECOLIN_RS15380 sulfate adenylyltransferase subunit CysN low > 52
Escherichia coli ECRC102 0.52 NIAGMN_16725 metC cystathionine beta-lyase 0.62 NIAGMN_18215 cysN sulfate adenylyltransferase subunit CysN — —
Escherichia fergusonii Becca 0.52 EFB2_00802 Cystathionine beta-lyase MetC 0.62 EFB2_01159 Sulfate adenylyltransferase subunit 1 low > 86
Escherichia coli ECRC101 0.52 OKFHMN_18960 metC cystathionine beta-lyase 0.62 OKFHMN_20445 cysN sulfate adenylyltransferase subunit CysN — —
Escherichia coli ECRC101 0.52 MCAODC_09475 metC cystathionine beta-lyase 0.62 MCAODC_10970 cysN sulfate adenylyltransferase subunit CysN — —
Escherichia coli ECRC98 0.52 JDDGAC_22595 metC cystathionine beta-lyase 0.62 JDDGAC_24110 cysN sulfate adenylyltransferase subunit CysN — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.61 GFF4799 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 78
Escherichia coli ECRC99 0.52 KEDOAH_09185 metC cystathionine beta-lyase 0.62 KEDOAH_07695 cysN sulfate adenylyltransferase subunit CysN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00693 Cystathionine beta-lyase MetC 0.62 OHPLBJKB_00982 Sulfate adenylyltransferase subunit 1 low > 73
Escherichia coli ECOR27 0.52 NOLOHH_10735 metC cystathionine beta-lyase 0.62 NOLOHH_12260 cysN sulfate adenylyltransferase subunit CysN low > 57
Escherichia coli ECRC62 0.52 BNILDI_00780 metC cystathionine beta-lyase 0.62 BNILDI_10810 cysN sulfate adenylyltransferase subunit CysN — —
Escherichia coli ECOR38 0.52 HEPCGN_17825 metC cystathionine beta-lyase 0.62 HEPCGN_19625 cysN sulfate adenylyltransferase subunit CysN low > 85
Escherichia coli BL21 0.52 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.61 ECD_02601 sulfate adenylyltransferase, subunit 1 low > 60
Escherichia coli BW25113 0.51 b3008 metC cystathionine beta-lyase (NCBI) 0.62 b2751 cysN sulfate adenylyltransferase subunit 1 (NCBI) 0.91 27
Klebsiella michiganensis M5al 0.51 BWI76_RS24285 cystathionine beta-lyase 0.63 BWI76_RS22695 sulfate adenylyltransferase 0.62 72
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.64 EX28DRAFT_2847 sulfate adenylyltransferase, large subunit 0.81 21
Enterobacter sp. TBS_079 0.50 MPMX20_03852 Cystathionine beta-lyase MetC 0.63 MPMX20_03637 Sulfate adenylyltransferase subunit 1 low > 85
Erwinia tracheiphila SCR3 0.49 LU632_RS20545 metC cystathionine beta-lyase 0.62 LU632_RS06430 cysN sulfate adenylyltransferase subunit CysN 0.72 38
Pantoea sp. MT58 0.47 IAI47_03215 cystathionine beta-lyase 0.63 IAI47_04185 sulfate adenylyltransferase subunit CysN low > 76
Rhizobium sp. OAE497 0.45 ABIE40_RS08820 cystathionine beta-lyase 0.41 ABIE40_RS04465 sulfate adenylyltransferase subunit CysN 0.28 42
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS11250 cystathionine beta-lyase 0.39 ABZR87_RS00190 sulfate adenylyltransferase subunit 1 0.34 30
Agrobacterium fabrum C58 0.43 Atu1575 cystathionine beta lyase 0.41 Atu0816 sulfate adenylate transferase, subunit 1 low > 89
Variovorax sp. OAS795 0.43 ABID97_RS22430 cystathionine beta-lyase 0.28 ABID97_RS15360 GTP-binding protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) 0.33 GFF4289 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 90
Variovorax sp. SCN45 0.41 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) 0.29 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 127
Ralstonia solanacearum PSI07 0.39 RPSI07_RS02185 cystathionine beta-lyase 0.40 RPSI07_RS12795 sulfate adenylyltransferase subunit 1 low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS20555 cystathionine beta-lyase 0.40 RALBFv3_RS04580 sulfate adenylyltransferase subunit 1 — —
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS30610 cystathionine beta-lyase 0.37 RR42_RS16250 sulfate adenylyltransferase low > 128
Ralstonia solanacearum UW163 0.38 UW163_RS18620 cystathionine beta-lyase 0.40 UW163_RS09090 sulfate adenylyltransferase subunit 1 — —
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS22165 cystathionine beta-lyase 0.41 QEN71_RS25235 sulfate adenylyltransferase subunit 1 low > 153
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00859 cystathionine beta-lyase 0.39 H281DRAFT_00118 sulfate adenylyltransferase subunit 1 low > 103
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS09190 cystathionine beta-lyase 0.39 BPHYT_RS04745 sulfate adenylyltransferase low > 109
Castellaniella sp019104865 MT123 0.36 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein 0.36 ABCV34_RS14120 GTP-binding protein low > 48
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS14995 cystathionine beta-lyase 0.40 HSERO_RS15570 sulfate adenylyltransferase low > 78
Ralstonia solanacearum GMI1000 0.34 RS_RS08260 cystathionine beta-lyase 0.39 RS_RS12150 sulfate adenylyltransferase subunit 1 low > 80
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) 0.31 Ac3H11_573 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 79

Not shown: 15 genomes with orthologs for Sama_2008 only; 15 genomes with orthologs for Sama_2890 only