Conservation of cofitness between Sama_0337 and Sama_1374 in Shewanella amazonensis SB2B

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 1.0 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.98 4
Shewanella sp. ANA-3 0.86 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.88 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.95 12
Shewanella loihica PV-4 0.86 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.86 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.93 37
Shewanella oneidensis MR-1 0.85 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.87 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.96 21
Escherichia fergusonii Becca 0.73 EFB2_03973 3-isopropylmalate dehydratase large subunit 0.56 EFB2_04597 Homoserine O-succinyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit 0.57 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECOR27 0.73 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 NOLOHH_05420 metA homoserine O-succinyltransferase 0.94 29
Escherichia coli Nissle 1917 0.73 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.56 ECOLIN_RS25515 homoserine O-succinyltransferase — —
Escherichia coli ECRC62 0.73 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 BNILDI_06100 metA homoserine O-succinyltransferase 0.95 44
Escherichia coli ECOR38 0.73 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 HEPCGN_11915 metA homoserine O-succinyltransferase 0.97 23
Escherichia coli BW25113 0.73 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.56 b4013 metA homoserine O-succinyltransferase (NCBI) 0.87 53
Escherichia coli BL21 0.73 ECD_00074 3-isopropylmalate dehydratase large subunit 0.56 ECD_03885 homoserine O-transsuccinylase 0.77 52
Escherichia coli ECRC101 0.72 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 MCAODC_03775 metA homoserine O-succinyltransferase 0.95 23
Escherichia coli ECRC100 0.72 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 OKFHMN_13275 metA homoserine O-succinyltransferase 0.95 45
Escherichia coli ECRC102 0.72 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 NIAGMN_11025 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC99 0.72 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 KEDOAH_14885 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC98 0.72 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.57 JDDGAC_16900 metA homoserine O-succinyltransferase 0.92 27
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.55 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.94 7
Klebsiella michiganensis M5al 0.72 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.55 BWI76_RS01655 homoserine O-succinyltransferase 0.94 8
Pantoea sp. MT58 0.72 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.58 IAI47_18015 homoserine O-succinyltransferase 0.97 18
Enterobacter sp. TBS_079 0.72 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.55 MPMX20_00230 Homoserine O-succinyltransferase 0.94 8
Rahnella sp. WP5 0.72 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.57 EX31_RS11735 homoserine O-succinyltransferase 0.99 9
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.55 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Dickeya dadantii 3937 0.71 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.57 DDA3937_RS19065 homoserine O-succinyltransferase 0.71 33
Serratia liquefaciens MT49 0.71 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.56 IAI46_23200 homoserine O-succinyltransferase low > 86
Dickeya dianthicola ME23 0.70 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.57 DZA65_RS20275 homoserine O-succinyltransferase 0.86 10
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.58 CSW01_08100 homoserine O-succinyltransferase low > 62
Dickeya dianthicola 67-19 0.70 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.57 HGI48_RS19155 homoserine O-succinyltransferase 0.80 12
Pectobacterium carotovorum WPP14 0.70 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.55 HER17_RS02285 homoserine O-succinyltransferase 0.98 8
Erwinia tracheiphila SCR3 0.68 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.57 LU632_RS22410 metA homoserine O-succinyltransferase 0.78 28
Alteromonas macleodii MIT1002 0.66 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.59 MIT1002_01112 Homoserine O-succinyltransferase 0.97 31
Azospirillum brasilense Sp245 0.62 AZOBR_RS03545 isopropylmalate isomerase 0.44 AZOBR_RS14010 homoserine O-succinyltransferase low > 97
Sinorhizobium meliloti 1021 0.61 SMc03823 isopropylmalate isomerase large subunit 0.43 SMc03797 homoserine O-succinyltransferase 0.98 5
Agrobacterium fabrum C58 0.61 Atu2709 3-isopropylmalate dehydratase, large subunit 0.45 Atu2718 homoserine O-succinyltransferase 0.97 4
Rhizobium sp. OAE497 0.60 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.45 ABIE40_RS18590 homoserine O-succinyltransferase 0.99 1
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.36 QEN71_RS42530 homoserine O-succinyltransferase low > 153
Dinoroseobacter shibae DFL-12 0.56 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) 0.45 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.45 PGA1_c14560 homoserine O-succinyltransferase MetA 0.76 42
Bifidobacterium breve UCC2003 0.52 BBR_RS19630 3-isopropylmalate dehydratase large subunit 0.43 BBR_RS11990 homoserine O-succinyltransferase low > 34
Bacteroides ovatus ATCC 8483 0.51 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.55 BACOVA_03007 homoserine O-succinyltransferase low > 94
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.54 HMPREF1181_RS00105 homoserine O-succinyltransferase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.50 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.55 BT2413 homoserine O-succinyltransferase (NCBI ptt file) low > 81
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase — —
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.53 HMPREF1078_RS10000 homoserine O-succinyltransferase low > 61
Phocaeicola vulgatus CL09T03C04 0.49 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.54 HMPREF1058_RS14680 homoserine O-succinyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.49 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.53 ABI39_RS10360 homoserine O-succinyltransferase low > 72

Not shown: 57 genomes with orthologs for Sama_0337 only; 0 genomes with orthologs for Sama_1374 only