| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Shewanella loihica PV-4 | 1.0 | Shew_3708 | | TetR family transcriptional regulator (RefSeq) | 1.0 | Shew_2504 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | 0.60 | 6 |
| Shewanella oneidensis MR-1 | 0.70 | SO4675 | | transcriptional regulator, TetR family (NCBI ptt file) | 0.63 | SO1798 | ppiD | peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.69 | Shewana3_4103 | | TetR family transcriptional regulator (RefSeq) | 0.63 | Shewana3_2657 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.64 | Sama_0099 | | TetR family transcriptional regulator (RefSeq) | 0.61 | Sama_1228 | | peptidyl-prolyl cis-trans isomerase D (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_01725 | | TetR family transcriptional regulator | 0.30 | CSW01_09595 | | peptidylprolyl isomerase | low | > 62 |
| Pseudomonas sp. SVBP6 | 0.30 | COO64_RS12870 | | TetR/AcrR family transcriptional regulator | 0.26 | COO64_RS19215 | | SurA N-terminal domain-containing protein | low | > 93 |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS20790 | | TetR/AcrR family transcriptional regulator | 0.26 | JOY50_RS25895 | | SurA N-terminal domain-containing protein | low | > 84 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_08285 | | TetR family transcriptional regulator | 0.25 | AO353_20200 | | peptidylprolyl isomerase | low | > 101 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_4757 | | transcriptional regulator, TetR family | 0.26 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_4757 | | transcriptional regulator, TetR family | 0.26 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_2316 | | Transcriptional regulator, TetR family | 0.26 | Pf1N1B4_3949 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.29 | DY961_RS21805 | | TetR/AcrR family transcriptional regulator | 0.24 | DY961_RS20755 | | SurA N-terminal domain-containing protein | — | — |
| Pseudomonas aeruginosa PA14 | 0.29 | IKLFDK_23595 | | TetR family transcriptional regulator | 0.24 | IKLFDK_08775 | | peptidylprolyl isomerase | low | > 98 |
| Pseudomonas putida KT2440 | 0.29 | PP_5119 | | Transcriptional regulator, TetR family | 0.26 | PP_2304 | | putative Peptidyl-prolyl cis-trans isomerase D | low | > 96 |
| Pseudomonas sp. S08-1 | 0.29 | OH686_14175 | | Transcriptional regulator, AcrR family | 0.25 | OH686_03625 | | Peptidyl-prolyl cis-trans isomerase PpiD | 0.63 | 79 |
| Pseudomonas aeruginosa PUPa3 | 0.29 | DQ20_RS37490 | | TetR/AcrR family transcriptional regulator | 0.24 | DQ20_RS54835 | | SurA N-terminal domain-containing protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_13305 | | TetR family transcriptional regulator | 0.25 | AO356_01725 | | peptidylprolyl isomerase | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_3328 | | transcriptional regulator, TetR family | 0.26 | HP15_2181 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 73 |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_986 | | Transcriptional regulator, TetR family | 0.26 | PfGW456L13_2556 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 87 |
| Pseudomonas sp. RS175 | 0.28 | PFR28_04265 | | hypothetical protein | 0.24 | PFR28_01231 | | Peptidyl-prolyl cis-trans isomerase D | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_0248 | | Transcriptional regulator | 0.25 | Psest_2283 | | Parvulin-like peptidyl-prolyl isomerase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS05390 | | TetR family transcriptional regulator | 0.19 | RR42_RS09045 | | peptidylprolyl isomerase | low | > 128 |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_4576 | | Transcriptional regulator, TetR family | 0.25 | Pf6N2E2_2214 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas sp. DMC3 | 0.27 | GFF232 | | hypothetical protein | 0.25 | GFF1447 | | Peptidyl-prolyl cis-trans isomerase D | low | > 89 |
| Pseudomonas segetis P6 | 0.27 | MPMX49_04420 | | hypothetical protein | 0.26 | MPMX49_02265 | | Peptidyl-prolyl cis-trans isomerase D | 0.74 | 6 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_26840 | | TetR family transcriptional regulator | 0.25 | PS417_17215 | | peptidylprolyl isomerase | low | > 88 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_001566 | | AcrR family transcriptional regulator | 0.17 | ABIE53_002134 | | peptidyl-prolyl cis-trans isomerase D | low | > 113 |
| Acinetobacter radioresistens SK82 | 0.26 | MPMX26_00377 | | hypothetical protein | 0.15 | MPMX26_01332 | | Peptidyl-prolyl cis-trans isomerase D | low | > 36 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.25 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.25 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas orientalis W4I3 | 0.26 | QF045_RS01240 | | TetR/AcrR family transcriptional regulator | 0.25 | QF045_RS18880 | | SurA N-terminal domain-containing protein | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.26 | GEMAOFIL_05505 | | hypothetical protein | 0.25 | GEMAOFIL_03740 | | Peptidyl-prolyl cis-trans isomerase D | low | > 96 |
| Acinetobacter baumannii LAC-4 | 0.25 | RR41_RS16725 | | TetR/AcrR family transcriptional regulator | 0.15 | RR41_RS12370 | | SurA N-terminal domain-containing protein | — | — |
| Lysobacter sp. OAE881 | 0.24 | ABIE51_RS12300 | | TetR/AcrR family transcriptional regulator | 0.22 | ABIE51_RS14120 | | peptidyl-prolyl cis-trans isomerase | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF404 | | Transcriptional regulator, TetR family | 0.19 | GFF3854 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 90 |
| Variovorax sp. SCN45 | 0.22 | GFF4992 | | Transcriptional regulator, AcrR family | 0.20 | GFF2852 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 127 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS04235 | | TetR/AcrR family transcriptional regulator | 0.18 | ABID97_RS10675 | | SurA N-terminal domain-containing protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.21 | Ac3H11_1877 | | Transcriptional regulator, TetR family | 0.19 | Ac3H11_377 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Agrobacterium fabrum C58 | 0.18 | Atu1568 | | transcriptional regulator, TetR family | 0.08 | Atu1686 | | peptidyl-prolyl cis-trans isomerse D | low | > 89 |
Not shown: 0 genomes with orthologs for Shew_3708 only; 62 genomes with orthologs for Shew_2504 only