Conservation of cofitness between Shew_3708 and Shew_2504 in Shewanella loihica PV-4

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_3708 TetR family transcriptional regulator (RefSeq) 1.0 Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.60 6
Shewanella oneidensis MR-1 0.70 SO4675 transcriptional regulator, TetR family (NCBI ptt file) 0.63 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.69 Shewana3_4103 TetR family transcriptional regulator (RefSeq) 0.63 Shewana3_2657 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_0099 TetR family transcriptional regulator (RefSeq) 0.61 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_01725 TetR family transcriptional regulator 0.30 CSW01_09595 peptidylprolyl isomerase low > 62
Pseudomonas sp. SVBP6 0.30 COO64_RS12870 TetR/AcrR family transcriptional regulator 0.26 COO64_RS19215 SurA N-terminal domain-containing protein low > 93
Pseudomonas sp. BP01 0.30 JOY50_RS20790 TetR/AcrR family transcriptional regulator 0.26 JOY50_RS25895 SurA N-terminal domain-containing protein low > 84
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_08285 TetR family transcriptional regulator 0.25 AO353_20200 peptidylprolyl isomerase low > 101
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4757 transcriptional regulator, TetR family 0.26 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4757 transcriptional regulator, TetR family 0.26 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_2316 Transcriptional regulator, TetR family 0.26 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS21805 TetR/AcrR family transcriptional regulator 0.24 DY961_RS20755 SurA N-terminal domain-containing protein
Pseudomonas aeruginosa PA14 0.29 IKLFDK_23595 TetR family transcriptional regulator 0.24 IKLFDK_08775 peptidylprolyl isomerase low > 98
Pseudomonas putida KT2440 0.29 PP_5119 Transcriptional regulator, TetR family 0.26 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D low > 96
Pseudomonas sp. S08-1 0.29 OH686_14175 Transcriptional regulator, AcrR family 0.25 OH686_03625 Peptidyl-prolyl cis-trans isomerase PpiD 0.63 79
Pseudomonas aeruginosa PUPa3 0.29 DQ20_RS37490 TetR/AcrR family transcriptional regulator 0.24 DQ20_RS54835 SurA N-terminal domain-containing protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_13305 TetR family transcriptional regulator 0.25 AO356_01725 peptidylprolyl isomerase
Marinobacter adhaerens HP15 0.28 HP15_3328 transcriptional regulator, TetR family 0.26 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase low > 73
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_986 Transcriptional regulator, TetR family 0.26 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 87
Pseudomonas sp. RS175 0.28 PFR28_04265 hypothetical protein 0.24 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D low > 88
Pseudomonas stutzeri RCH2 0.28 Psest_0248 Transcriptional regulator 0.25 Psest_2283 Parvulin-like peptidyl-prolyl isomerase
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS05390 TetR family transcriptional regulator 0.19 RR42_RS09045 peptidylprolyl isomerase low > 128
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4576 Transcriptional regulator, TetR family 0.25 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Pseudomonas sp. DMC3 0.27 GFF232 hypothetical protein 0.25 GFF1447 Peptidyl-prolyl cis-trans isomerase D low > 89
Pseudomonas segetis P6 0.27 MPMX49_04420 hypothetical protein 0.26 MPMX49_02265 Peptidyl-prolyl cis-trans isomerase D 0.74 6
Pseudomonas simiae WCS417 0.26 PS417_26840 TetR family transcriptional regulator 0.25 PS417_17215 peptidylprolyl isomerase low > 88
Paraburkholderia graminis OAS925 0.26 ABIE53_001566 AcrR family transcriptional regulator 0.17 ABIE53_002134 peptidyl-prolyl cis-trans isomerase D low > 113
Acinetobacter radioresistens SK82 0.26 MPMX26_00377 hypothetical protein 0.15 MPMX26_01332 Peptidyl-prolyl cis-trans isomerase D low > 36
Pseudomonas fluorescens SBW25 0.26 PFLU_RS28485 TetR/AcrR family transcriptional regulator 0.25 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS28485 TetR/AcrR family transcriptional regulator 0.25 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase
Pseudomonas orientalis W4I3 0.26 QF045_RS01240 TetR/AcrR family transcriptional regulator 0.25 QF045_RS18880 SurA N-terminal domain-containing protein low > 93
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_05505 hypothetical protein 0.25 GEMAOFIL_03740 Peptidyl-prolyl cis-trans isomerase D low > 96
Acinetobacter baumannii LAC-4 0.25 RR41_RS16725 TetR/AcrR family transcriptional regulator 0.15 RR41_RS12370 SurA N-terminal domain-containing protein
Lysobacter sp. OAE881 0.24 ABIE51_RS12300 TetR/AcrR family transcriptional regulator 0.22 ABIE51_RS14120 peptidyl-prolyl cis-trans isomerase low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF404 Transcriptional regulator, TetR family 0.19 GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 90
Variovorax sp. SCN45 0.22 GFF4992 Transcriptional regulator, AcrR family 0.20 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 127
Variovorax sp. OAS795 0.22 ABID97_RS04235 TetR/AcrR family transcriptional regulator 0.18 ABID97_RS10675 SurA N-terminal domain-containing protein low > 91
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1877 Transcriptional regulator, TetR family 0.19 Ac3H11_377 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Agrobacterium fabrum C58 0.18 Atu1568 transcriptional regulator, TetR family 0.08 Atu1686 peptidyl-prolyl cis-trans isomerse D low > 89

Not shown: 0 genomes with orthologs for Shew_3708 only; 62 genomes with orthologs for Shew_2504 only