Conservation of cofitness between Dshi_2226 and Dshi_1263 in Dinoroseobacter shibae DFL-12

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_2226 Glutamate--putrescine ligase (RefSeq) 1.0 Dshi_1263 efflux transporter, RND family, MFP subunit (RefSeq) 0.32 18
Phaeobacter inhibens DSM 17395 0.75 PGA1_c11520 gamma-glutamylputrescine synthetase PuuA 0.13 PGA1_c24620 putative secretion protein low > 62
Sinorhizobium meliloti 1021 0.50 SMc00762 glutamine synthetase 0.12 SM_b20346 efflux protein low > 103
Paraburkholderia graminis OAS925 0.49 ABIE53_002230 glutamine synthetase 0.10 ABIE53_002353 multidrug efflux system membrane fusion protein low > 113
Shewanella loihica PV-4 0.49 Shew_0972 glutamate--ammonia ligase (RefSeq) 0.16 Shew_0467 RND family efflux transporter MFP subunit (RefSeq) low > 60
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_01081 L-glutamine synthetase 0.11 H281DRAFT_00699 RND family efflux transporter, MFP subunit low > 103
Rhizobium sp. OAE497 0.49 ABIE40_RS03210 glutamine synthetase family protein 0.12 ABIE40_RS17050 efflux RND transporter periplasmic adaptor subunit low > 107
Agrobacterium fabrum C58 0.48 Atu0602 glutamine synthetase 0.11 Atu5382 HlyD family secretion protein
Pseudomonas sp. S08-1 0.48 OH686_11475 glutamine synthetase family protein 0.14 OH686_06745 Multidrug efflux system, membrane fusion component low > 80
Azospirillum sp. SherDot2 0.48 MPMX19_04886 Gamma-glutamylputrescine synthetase PuuA 0.13 MPMX19_05261 Multidrug resistance protein MdtE low > 112
Pseudomonas putida KT2440 0.48 PP_3148 putative Glutamine synthetase 0.11 PP_1516 RND membrane fusion protein low > 96
Azospirillum brasilense Sp245 0.47 AZOBR_RS08850 glutamine synthetase 0.11 AZOBR_RS04615 hypothetical protein low > 97
Pseudomonas stutzeri RCH2 0.47 Psest_4286 Glutamine synthetase 0.12 Psest_1565 RND family efflux transporter, MFP subunit low > 67
Shewanella sp. ANA-3 0.47 Shewana3_3098 L-glutamine synthetase (RefSeq) 0.17 Shewana3_3571 RND family efflux transporter MFP subunit (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_926 glutamine synthetase family protein 0.13 PfGW456L13_4731 RND efflux membrane fusion protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08590 glutamine synthetase 0.13 AO353_16360 RND transporter low > 101
Pseudomonas simiae WCS417 0.47 PS417_27135 glutamine synthetase 0.14 PS417_06110 RND transporter low > 88
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_4826 glutamine synthetase family protein 0.13 Pf1N1B4_3062 RND efflux membrane fusion protein low > 87
Pseudomonas sp. RS175 0.47 PFR28_04297 Gamma-glutamylputrescine synthetase PuuA 0.13 PFR28_00378 Multidrug resistance protein MdtA low > 88
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_13145 glutamine synthetase 0.13 AO356_06135 RND transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_4511 glutamine synthetase family protein 0.12 Pf6N2E2_3092 RND efflux membrane fusion protein low > 103
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28785 glutamine synthetase 0.15 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28785 glutamine synthetase 0.15 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_4867 L-glutamine synthetase 0.08 Psyr_0345 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_4867 L-glutamine synthetase 0.08 Psyr_0345 Secretion protein HlyD low > 86
Shewanella amazonensis SB2B 0.46 Sama_2644 glutamate--ammonia ligase (RefSeq) 0.14 Sama_1715 acriflavin resistance periplasmic protein (RefSeq) low > 62
Klebsiella michiganensis M5al 0.26 BWI76_RS10710 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) 0.11 BWI76_RS18510 membrane protein low > 92
Enterobacter asburiae PDN3 0.26 EX28DRAFT_1498 Glutamine synthetase 0.12 EX28DRAFT_0560 RND family efflux transporter, MFP subunit low > 76
Rahnella sp. WP5 0.26 EX31_RS17895 glutamine synthetase 0.12 EX31_RS02980 efflux RND transporter periplasmic adaptor subunit low > 89
Acinetobacter radioresistens SK82 0.22 MPMX26_02239 Gamma-glutamylputrescine synthetase PuuA 0.10 MPMX26_03011 Multidrug resistance protein MdtA
Rhodopseudomonas palustris CGA009 0.19 TX73_007190 glutamine synthetase family protein 0.11 TX73_010140 efflux RND transporter periplasmic adaptor subunit low > 86

Not shown: 25 genomes with orthologs for Dshi_2226 only; 11 genomes with orthologs for Dshi_1263 only