Conservation of cofitness between BT4003 and BT0203 in Bacteroides thetaiotaomicron VPI-5482

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT4003 stationary-phase survival protein SurE (NCBI ptt file) 1.0 BT0203 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) 0.30 15
Bacteroides ovatus ATCC 8483 0.84 BACOVA_04822 5'/3'-nucleotidase SurE 0.95 BACOVA_01232 histidinol-phosphatase low > 94
Bacteroides stercoris CC31F 0.74 HMPREF1181_RS09175 5'/3'-nucleotidase SurE 0.90 HMPREF1181_RS04850 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 56
Phocaeicola vulgatus CL09T03C04 0.64 HMPREF1058_RS14085 5'/3'-nucleotidase SurE 0.85 HMPREF1058_RS15885 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 67
Phocaeicola dorei CL03T12C01 0.64 ABI39_RS09735 5'/3'-nucleotidase SurE 0.85 ABI39_RS11845 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 72
Parabacteroides merdae CL09T00C40 0.50 HMPREF1078_RS04545 5'/3'-nucleotidase SurE 0.77 HMPREF1078_RS02440 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS16310 5'/3'-nucleotidase SurE 0.61 CA265_RS03625 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_3388 5'/3'-nucleotidase SurE 0.65 Echvi_2457 histidinol-phosphatase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_12185 5'/3'-nucleotidase SurE 0.62 CA264_05040 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS03555 5'/3'-nucleotidase SurE 0.64 ABZR88_RS06870 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_02820 5'-nucleotidase SurE 0.46 CSW01_05760 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase low > 62
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS06595 5'/3'-nucleotidase SurE 0.44 ABZR86_RS06720 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 74
Rhodanobacter denitrificans MT42 0.26 LRK55_RS16375 5'/3'-nucleotidase SurE 0.43 LRK55_RS01375 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS16650 5'/3'-nucleotidase SurE 0.43 LRK54_RS01595 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 59
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_08115 surE 5'/3'-nucleotidase SurE 0.43 OKGIIK_04960 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 52
Shewanella loihica PV-4 0.25 Shew_1210 stationary-phase survival protein SurE (RefSeq) 0.44 Shew_2200 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.25 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) 0.44 SO2071 hisB imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase (NCBI ptt file) 0.88 14
Shewanella amazonensis SB2B 0.25 Sama_1041 surE stationary phase survival protein SurE (RefSeq) 0.44 Sama_1944 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) low > 62
Shewanella sp. ANA-3 0.25 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) 0.45 Shewana3_1851 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.67 38
Serratia liquefaciens MT49 0.25 IAI46_03775 5'/3'-nucleotidase SurE 0.46 IAI46_08200 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 86
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.3131.1 hypothetical protein 0.44 Xcc-8004.2946.1 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 74
Erwinia tracheiphila SCR3 0.24 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.45 LU632_RS08935 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 74
Lysobacter sp. OAE881 0.24 ABIE51_RS06485 5'/3'-nucleotidase SurE 0.46 ABIE51_RS13315 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 62
Rahnella sp. WP5 0.24 EX31_RS07840 5'/3'-nucleotidase SurE 0.46 EX31_RS11450 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 89
Enterobacter sp. TBS_079 0.23 MPMX20_03630 5'/3'-nucleotidase SurE 0.43 MPMX20_03004 Histidine biosynthesis bifunctional protein HisB low > 85
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.43 EX28DRAFT_0537 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 76
Pantoea sp. MT58 0.23 IAI47_04220 5'/3'-nucleotidase SurE 0.45 IAI47_07080 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.46 60
Klebsiella michiganensis M5al 0.22 BWI76_RS22660 5'/3'-nucleotidase SurE 0.44 BWI76_RS18935 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase low > 92
Escherichia coli ECRC101 0.22 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.44 OKFHMN_24505 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECRC102 0.22 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.44 NIAGMN_22450 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli BW25113 0.22 b2744 surE acid phosphatase (NCBI) 0.44 b2022 hisB imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) low > 76
Escherichia coli Nissle 1917 0.22 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.43 ECOLIN_RS11955 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECRC99 0.22 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.44 KEDOAH_03645 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli BL21 0.22 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.43 ECD_01924 histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase low > 60
Escherichia coli ECRC98 0.22 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.44 JDDGAC_28615 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia fergusonii Becca 0.22 EFB2_01166 5'/3'-nucleotidase SurE 0.44 EFB2_01834 Histidine biosynthesis bifunctional protein HisB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.44 OHPLBJKB_01678 Histidine biosynthesis bifunctional protein HisB low > 73
Escherichia coli ECRC101 0.22 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.44 MCAODC_20435 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECOR27 0.22 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 0.44 NOLOHH_15820 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.67 6
Escherichia coli ECRC62 0.22 BNILDI_10845 surE 5'/3'-nucleotidase SurE 0.44 BNILDI_14730 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECOR38 0.22 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.44 HEPCGN_03210 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.44 GFF3910 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 78

Not shown: 54 genomes with orthologs for BT4003 only; 5 genomes with orthologs for BT0203 only