Conservation of cofitness between SO2339 and SO1679 in Shewanella oneidensis MR-1

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file) 1.0 SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.53 5
Shewanella sp. ANA-3 1.00 Shewana3_2131 dehydrogenase, E1 component (RefSeq) 0.98 Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) 0.56 9
Shewanella loihica PV-4 0.91 Shew_1925 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (RefSeq) 0.91 Shew_1669 butyryl-CoA dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.89 Sama_1709 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (RefSeq) 0.92 Sama_1377 butyryl-CoA dehydrogenase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_02012 Pyruvate dehydrogenase E1 component subunit alpha 0.75 MIT1002_01978 Acyl-CoA dehydrogenase low > 70
Marinobacter adhaerens HP15 0.60 HP15_1634 branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit 0.68 HP15_907 acyl-CoA dehydrogenase domain protein low > 73
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS13200 thiamine pyrophosphate-dependent enzyme 0.60 A4249_RS03585 isobutyryl-CoA dehydrogenase low > 48
Sinorhizobium meliloti 1021 0.27 SMc03201 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.53 SM_b20753 acyl-CoA dehydrogenase 0.14 99
Castellaniella sp019104865 MT123 0.27 ABCV34_RS04975 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha 0.67 ABCV34_RS03995 acyl-CoA dehydrogenase family protein 0.98 8
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_481 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.41 Pf6N2E2_1146 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.48 19
Pseudomonas sp. RS175 0.26 PFR28_02445 2-oxoisovalerate dehydrogenase subunit alpha 0.41 PFR28_01883 Acyl-CoA dehydrogenase 0.56 22
Agrobacterium fabrum C58 0.26 Atu3473 2-oxoisovalerate dehydrogenase subunit alpha 0.38 Atu3474 acyl-CoA dehydrogenase 0.43 5
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4480 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) 0.42 Pf1N1B4_4787 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.23 47
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_22990 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.41 AO356_26355 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.61 8
Pseudomonas putida KT2440 0.26 PP_4401 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit 0.42 PP_2216 short-chain acyl-CoA dehydrogenase 0.35 17
Variovorax sp. OAS795 0.26 ABID97_RS06670 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha 0.67 ABID97_RS19415 acyl-CoA dehydrogenase family protein low > 91
Bosea sp. OAE506 0.26 ABIE41_RS02485 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha 0.56 ABIE41_RS23925 isobutyryl-CoA dehydrogenase low > 77
Mycobacterium tuberculosis H37Rv 0.25 Rv2497c Probable branched-chain keto acid dehydrogenase E1 component, alpha subunit BkdA 0.46 Rv0752c Probable acyl-CoA dehydrogenase FadE9 low > 58
Pseudomonas simiae WCS417 0.25 PS417_17545 2-oxoisovalerate dehydrogenase 0.42 PS417_13850 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.28 29
Pseudomonas fluorescens SBW25 0.25 PFLU_RS19355 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha 0.42 PFLU_RS14770 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_3540 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.41 PfGW456L13_2983 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.40 32
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS19355 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha 0.42 PFLU_RS14770 acyl-CoA dehydrogenase 0.45 17
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_26635 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.41 AO353_25680 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) (from data) 0.30 79
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.571.1 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) 0.64 Xcc-8004.3688.1 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) 0.79 3
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_1477 pyruvate dehydrogenase E1 component, alpha subunit 0.42 B158DRAFT_2510 Acyl-CoA dehydrogenases
Ralstonia solanacearum UW163 0.20 UW163_RS14260 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 0.37 UW163_RS03075 butyryl-CoA dehydrogenase
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS00950 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 0.37 RALBFv3_RS10505 butyryl-CoA dehydrogenase low > 76
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS33045 pyruvate dehydrogenase 0.39 RR42_RS00895 acyl-CoA dehydrogenase low > 128
Phaeobacter inhibens DSM 17395 0.18 PGA1_c23140 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha 0.52 PGA1_c17340 acyl-CoA dehydrogenase AcdA 0.23 55
Dinoroseobacter shibae DFL-12 0.15 Dshi_2158 Pyruvate dehydrogenase (acetyl-transferring) (RefSeq) 0.49 Dshi_1750 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_01799 pyruvate dehydrogenase E1 component alpha subunit 0.61 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific
Caulobacter crescentus NA1000 0.14 CCNA_01799 pyruvate dehydrogenase E1 component alpha subunit 0.61 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific

Not shown: 1 genomes with orthologs for SO2339 only; 43 genomes with orthologs for SO1679 only