Conservation of cofitness between SO0873 and SO0977 in Shewanella oneidensis MR-1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 1.0 SO0977 transcriptional regulator, MarR family (NCBI ptt file) 0.36 2
Shewanella sp. ANA-3 0.90 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.88 Shewana3_3311 MarR family transcriptional regulator (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.58 Sama_0628 MarR family transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3130 glutamate--tRNA ligase (RefSeq) 0.61 Shew_0799 MarR family transcriptional regulator (RefSeq) low > 60
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.39 EX28DRAFT_3564 Transcriptional regulators low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.41 MPMX20_00654 Organic hydroperoxide resistance transcriptional regulator low > 85
Serratia liquefaciens MT49 0.49 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.43 IAI46_00420 MarR family transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.47 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS 0.42 HER17_RS06400 MarR family transcriptional regulator low > 75
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 CSW01_19135 MarR family transcriptional regulator low > 62
Erwinia tracheiphila SCR3 0.46 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.41 LU632_RS00235 MarR family transcriptional regulator low > 74
Alteromonas macleodii MIT1002 0.44 MIT1002_03691 Glutamyl-Q tRNA(Asp) synthetase 0.32 MIT1002_00888 Organic hydroperoxide resistance transcriptional regulator low > 70
Pseudomonas sp. S08-1 0.42 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase 0.40 OH686_22590 Organic hydroperoxide resistance transcriptional regulator low > 80
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1527 glutamyl-Q-tRNA synthetase 0.41 PfGW456L13_2255 Organic hydroperoxide resistance transcriptional regulator low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase 0.40 Pf6N2E2_2443 Organic hydroperoxide resistance transcriptional regulator low > 103
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS00575 tRNA glutamyl-Q(34) synthetase GluQRS 0.41 ABZR86_RS08950 MarR family transcriptional regulator low > 74
Pseudomonas sp. DMC3 0.39 GFF4033 Glutamyl-Q tRNA(Asp) synthetase 0.42 GFF4593 Organic hydroperoxide resistance transcriptional regulator low > 89
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16090 glutamyl-Q tRNA(Asp) ligase 0.42 AO356_03075 MarR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_14415 glutamyl-Q tRNA(Asp) ligase 0.41 AO353_19165 MarR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase 0.42 Pf1N1B4_258 Organic hydroperoxide resistance transcriptional regulator low > 87
Dechlorosoma suillum PS 0.39 Dsui_1040 glutamyl-queuosine tRNA(Asp) synthetase 0.40 Dsui_2172 transcriptional regulator low > 51
Pseudomonas sp. RS175 0.39 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase 0.40 PFR28_00987 Organic hydroperoxide resistance transcriptional regulator low > 88
Pseudomonas simiae WCS417 0.38 PS417_23880 glutamyl-Q tRNA(Asp) ligase 0.41 PS417_08495 MarR family transcriptional regulator — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.2261.1 glutamyl-Q-tRNA synthetase 0.42 Xcc-8004.339.1 Organic hydroperoxide resistance transcriptional regulator low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.38 Psyr_3626 transcriptional regulator, MarR family low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.38 Psyr_3626 transcriptional regulator, MarR family low > 86
Methylophilus sp. DMC18 0.37 GFF102 Glutamyl-Q tRNA(Asp) synthetase 0.39 GFF1759 Organic hydroperoxide resistance transcriptional regulator low > 43
Marinobacter adhaerens HP15 0.35 HP15_331 glutamyl-Q tRNA(Asp) synthetase 0.41 HP15_2792 transcriptional regulator MarR family protein low > 73
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12295 glutamyl-Q tRNA(Asp) synthetase 0.39 ABCV34_RS12000 MarR family transcriptional regulator low > 48
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS15535 tRNA glutamyl-Q(34) synthetase GluQRS 0.42 ABZR87_RS22150 MarR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14805 glutamyl-Q tRNA(Asp) ligase 0.37 RR42_RS22585 MarR family transcriptional regulator low > 128

Not shown: 49 genomes with orthologs for SO0873 only; 5 genomes with orthologs for SO0977 only