Conservation of cofitness between b3942 and b3788 in Escherichia coli BW25113

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) 1.0 b3788 rffG dTDP-glucose 4,6-dehydratase (NCBI) 0.25 20
Escherichia coli ECRC101 1.00 MCAODC_04160 katG catalase/peroxidase HPI 0.99 MCAODC_05065 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli ECRC98 1.00 JDDGAC_17285 katG catalase/peroxidase HPI 0.99 JDDGAC_18185 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli ECRC101 1.00 OKFHMN_13660 katG catalase/peroxidase HPI 0.99 OKFHMN_14560 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli ECOR27 1.00 NOLOHH_05805 katG catalase/peroxidase HPI 0.99 NOLOHH_06695 rffG dTDP-glucose 4,6-dehydratase low > 57
Escherichia coli ECRC62 1.00 BNILDI_05730 katG catalase/peroxidase HPI 0.99 BNILDI_04830 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli ECRC99 1.00 KEDOAH_14500 katG catalase/peroxidase HPI 0.99 KEDOAH_13590 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli BL21 1.00 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.99 ECD_03666 dTDP-glucose 4,6-dehydratase low > 60
Escherichia coli ECRC102 1.00 NIAGMN_11415 katG catalase/peroxidase HPI 0.99 NIAGMN_12315 rffG dTDP-glucose 4,6-dehydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04108 Catalase-peroxidase 0.99 OHPLBJKB_04266 dTDP-glucose 4,6-dehydratase 2 low > 73
Escherichia coli ECOR38 1.00 HEPCGN_12305 katG catalase/peroxidase HPI 0.99 HEPCGN_13270 rffG dTDP-glucose 4,6-dehydratase low > 85
Escherichia fergusonii Becca 1.00 EFB2_04671 Catalase-peroxidase 0.99 EFB2_04851 dTDP-glucose 4,6-dehydratase 2 low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22765 catalase/peroxidase HPI 0.98 ECOLIN_RS21745 dTDP-glucose 4,6-dehydratase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.89 GFF2885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 78
Rahnella sp. WP5 0.81 EX31_RS11140 catalase/peroxidase HPI 0.80 EX31_RS11515 dTDP-glucose 4,6-dehydratase
Pantoea sp. MT58 0.80 IAI47_07215 catalase/peroxidase HPI 0.80 IAI47_18500 dTDP-glucose 4,6-dehydratase
Klebsiella michiganensis M5al 0.80 BWI76_RS13925 catalase/peroxidase HPI 0.76 BWI76_RS19065 dTDP-glucose 4,6-dehydratase low > 92
Pseudomonas sp. S08-1 0.69 OH686_15490 catalase/peroxidase HPI 0.74 OH686_14380 dTDP-glucose 4,6-dehydratase
Dickeya dianthicola ME23 0.61 DZA65_RS08685 catalase/peroxidase HPI 0.80 DZA65_RS07110 dTDP-glucose 4,6-dehydratase low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS08090 catalase/peroxidase HPI 0.80 HGI48_RS06755 dTDP-glucose 4,6-dehydratase low > 71
Dickeya dadantii 3937 0.61 DDA3937_RS07265 catalase/peroxidase HPI 0.80 DDA3937_RS06735 dTDP-glucose 4,6-dehydratase low > 74
Serratia liquefaciens MT49 0.61 IAI46_17030 catalase/peroxidase HPI 0.83 IAI46_00610 dTDP-glucose 4,6-dehydratase low > 86
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.75 Pf6N2E2_3878 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_07735 hydroperoxidase 0.75 AO356_10040 dTDP-glucose 4,6-dehydratase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4208 heme catalase/peroxidase 0.73 Psyr_4935 dTDP-glucose 4,6-dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4208 heme catalase/peroxidase 0.73 Psyr_4935 dTDP-glucose 4,6-dehydratase low > 86
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_23210 hydroperoxidase 0.76 AO353_11885 dTDP-glucose 4,6-dehydratase
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.56 Xcc-8004.4486.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 74
Lysobacter sp. OAE881 0.60 ABIE51_RS07780 catalase/peroxidase HPI 0.55 ABIE51_RS15620 dTDP-glucose 4,6-dehydratase low > 62
Pseudomonas putida KT2440 0.60 PP_3668 Catalase-peroxidase 0.61 PP_1785 dTDP-glucose 4,6-dehydratase 2
Rhodopseudomonas palustris CGA009 0.60 TX73_002230 catalase/peroxidase HPI 0.22 TX73_020345 GDP-mannose 4,6-dehydratase low > 86
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS00615 catalase/peroxidase HPI 0.57 ABZR86_RS18735 dTDP-glucose 4,6-dehydratase low > 74
Sinorhizobium meliloti 1021 0.58 SMa2379 KatB catalase/peroxidase 0.56 SM_b21326 dTDP-D-glucose 4,6-dehydratase low > 103
Azospirillum sp. SherDot2 0.58 MPMX19_03084 Catalase-peroxidase 0.70 MPMX19_06725 dTDP-glucose 4,6-dehydratase 2
Pseudomonas stutzeri RCH2 0.58 Psest_2741 catalase/peroxidase HPI 0.75 Psest_4262 dTDP-glucose 4,6-dehydratase
Rhizobium sp. OAE497 0.57 ABIE40_RS15040 catalase/peroxidase HPI 0.62 ABIE40_RS08670 dTDP-glucose 4,6-dehydratase low > 107
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_03138 peroxidase/catalase katG 0.60 CCNA_03744 dTDP-glucose 4,6-dehydratase low > 67
Caulobacter crescentus NA1000 0.57 CCNA_03138 peroxidase/catalase katG 0.60 CCNA_03744 dTDP-glucose 4,6-dehydratase low > 66
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_1656 katG catalase/peroxidase HPI 0.63 Synpcc7942_2100 rfbB dTDP-glucose 4,6-dehydratase low > 38
Pectobacterium carotovorum WPP14 0.56 HER17_RS09165 catalase/peroxidase HPI 0.84 HER17_RS01165 dTDP-glucose 4,6-dehydratase
Agrobacterium fabrum C58 0.54 Atu4642 catalase 0.64 Atu4617 dTDP-D-glucose-4,6-dehydratase
Bosea sp. OAE506 0.52 ABIE41_RS01200 catalase/peroxidase HPI 0.66 ABIE41_RS02850 dTDP-glucose 4,6-dehydratase low > 77
Phaeobacter inhibens DSM 17395 0.51 PGA1_78p00050 peroxidase/catalase HPI 0.61 PGA1_65p00240 dTDP-glucose 4,6-dehydratase RffG low > 62
Mycobacterium tuberculosis H37Rv 0.51 Rv1908c Catalase-peroxidase-peroxynitritase T KatG 0.40 Rv3464 dTDP-glucose 4,6-dehydratase RmlB
Dinoroseobacter shibae DFL-12 0.50 Dshi_3801 catalase/peroxidase HPI (RefSeq) 0.60 Dshi_4115 dTDP-glucose 4,6-dehydratase (RefSeq) 0.23 44

Not shown: 30 genomes with orthologs for b3942 only; 18 genomes with orthologs for b3788 only