Conservation of cofitness between b0003 and b3771 in Escherichia coli BW25113

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0003 thrB homoserine kinase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.91 15
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03657 Homoserine kinase 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_03435 thrB homoserine kinase 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Escherichia coli ECOR38 1.00 HEPCGN_09110 thrB homoserine kinase 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli BL21 1.00 ECD_00003 homoserine kinase 1.00 ECD_03649 dihydroxyacid dehydratase 0.70 19
Escherichia coli ECRC62 1.00 BNILDI_08165 thrB homoserine kinase 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 1.00 OKFHMN_11105 thrB homoserine kinase 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 1.00 NIAGMN_08955 thrB homoserine kinase 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 1.00 EFB2_04040 Homoserine kinase 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC101 1.00 MCAODC_01620 thrB homoserine kinase 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC99 1.00 KEDOAH_17050 thrB homoserine kinase 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00015 homoserine kinase 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Escherichia coli ECRC98 1.00 JDDGAC_14700 thrB homoserine kinase 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1079 Homoserine kinase (EC 2.7.1.39) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3615 homoserine kinase (EC 2.7.1.39) 0.96 EX28DRAFT_4443 dihydroxy-acid dehydratase — —
Enterobacter sp. TBS_079 0.91 MPMX20_00711 Homoserine kinase 0.97 MPMX20_04499 Dihydroxy-acid dehydratase 0.95 3
Klebsiella michiganensis M5al 0.89 BWI76_RS04250 homoserine kinase 0.96 BWI76_RS00975 dihydroxy-acid dehydratase 0.93 6
Pantoea sp. MT58 0.82 IAI47_16210 homoserine kinase 0.89 IAI47_01035 dihydroxy-acid dehydratase 0.96 4
Rahnella sp. WP5 0.81 EX31_RS03940 homoserine kinase 0.87 EX31_RS15005 dihydroxy-acid dehydratase 0.99 3
Pectobacterium carotovorum WPP14 0.81 HER17_RS02800 homoserine kinase 0.91 HER17_RS01075 dihydroxy-acid dehydratase 0.88 27
Dickeya dadantii 3937 0.81 DDA3937_RS18410 homoserine kinase 0.92 DDA3937_RS20155 dihydroxy-acid dehydratase 0.88 4
Dickeya dianthicola ME23 0.81 DZA65_RS19480 homoserine kinase 0.91 DZA65_RS21335 dihydroxy-acid dehydratase 0.85 6
Dickeya dianthicola 67-19 0.81 HGI48_RS18340 homoserine kinase 0.91 HGI48_RS20295 dihydroxy-acid dehydratase 0.88 6
Serratia liquefaciens MT49 0.80 IAI46_03035 homoserine kinase 0.90 IAI46_24345 dihydroxy-acid dehydratase 0.84 18
Erwinia tracheiphila SCR3 0.77 LU632_RS02615 thrB homoserine kinase 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.78 19
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_11970 homoserine kinase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Shewanella loihica PV-4 0.53 Shew_1080 homoserine kinase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.93 16
Shewanella amazonensis SB2B 0.52 Sama_0906 homoserine kinase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.97 3
Shewanella oneidensis MR-1 0.52 SO3414 thrB homoserine kinase (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.96 5
Shewanella sp. ANA-3 0.51 Shewana3_1140 homoserine kinase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.96 3
Alteromonas macleodii MIT1002 0.49 MIT1002_03085 Homoserine kinase 0.79 MIT1002_04041 Dihydroxy-acid dehydratase 0.95 27
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS18955 homoserine kinase 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase — —
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1440 thrB homoserine kinase 0.75 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_2001 homoserine kinase (EC 2.7.1.39) (from data) 0.29 Echvi_2055 dihydroxy-acid dehydratase 0.97 4
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS23470 homoserine kinase (EC 2.7.1.39) (from data) 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.95 9
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS10360 homoserine kinase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase 0.72 6
Lysobacter sp. OAE881 0.18 ABIE51_RS17525 homoserine kinase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.96 30
Rhodanobacter denitrificans MT42 0.18 LRK55_RS10000 homoserine kinase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase — —
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_13565 thrB homoserine kinase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.2956.1 Homoserine kinase (EC 2.7.1.39) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.73 29
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS15980 homoserine kinase (EC 2.7.1.39) (from data) 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase 0.94 12
Methanococcus maripaludis JJ 0.15 MMJJ_RS03790 homoserine kinase 0.35 MMJJ_RS03675 dihydroxy-acid dehydratase — —
Methanococcus maripaludis S2 0.14 MMP_RS01585 homoserine kinase 0.35 MMP_RS01700 dihydroxy-acid dehydratase — —

Not shown: 0 genomes with orthologs for b0003 only; 59 genomes with orthologs for b3771 only