Conservation of cofitness between b3941 and b2022 in Escherichia coli BW25113

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) 1.0 b2022 hisB imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) 0.97 4
Escherichia coli ECRC62 1.00 BNILDI_05725 metF methylenetetrahydrofolate reductase 0.99 BNILDI_14730 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase 0.99 OHPLBJKB_01678 Histidine biosynthesis bifunctional protein HisB low > 73
Escherichia coli BL21 1.00 ECD_03827 5,10-methylenetetrahydrofolate reductase 0.99 ECD_01924 histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase 0.49 50
Escherichia coli ECOR27 1.00 NOLOHH_05810 metF methylenetetrahydrofolate reductase 1.00 NOLOHH_15820 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 57
Escherichia coli ECOR38 1.00 HEPCGN_12310 metF methylenetetrahydrofolate reductase 0.99 HEPCGN_03210 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 85
Escherichia coli ECRC98 1.00 JDDGAC_17290 metF methylenetetrahydrofolate reductase 1.00 JDDGAC_28615 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia coli ECRC101 1.00 OKFHMN_13665 metF methylenetetrahydrofolate reductase 1.00 OKFHMN_24505 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia coli ECRC102 1.00 NIAGMN_11420 metF methylenetetrahydrofolate reductase 1.00 NIAGMN_22450 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia coli ECRC101 1.00 MCAODC_04165 metF methylenetetrahydrofolate reductase 1.00 MCAODC_20435 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia coli ECRC99 1.00 KEDOAH_14495 metF methylenetetrahydrofolate reductase 1.00 KEDOAH_03645 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Escherichia fergusonii Becca 0.99 EFB2_04672 5,10-methylenetetrahydrofolate reductase 0.99 EFB2_01834 Histidine biosynthesis bifunctional protein HisB low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22760 methylenetetrahydrofolate reductase 0.99 ECOLIN_RS11955 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.96 GFF3910 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_04529 5,10-methylenetetrahydrofolate reductase 0.92 MPMX20_03004 Histidine biosynthesis bifunctional protein HisB 0.75 13
Klebsiella michiganensis M5al 0.95 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase 0.88 BWI76_RS18935 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase 0.88 24
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.91 EX28DRAFT_0537 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 76
Pantoea sp. MT58 0.92 IAI47_00890 methylenetetrahydrofolate reductase 0.82 IAI47_07080 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.48 42
Serratia liquefaciens MT49 0.91 IAI46_24530 methylenetetrahydrofolate reductase 0.84 IAI46_08200 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 86
Dickeya dadantii 3937 0.90 DDA3937_RS00960 methylenetetrahydrofolate reductase 0.84 DDA3937_RS09725 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.43 24
Rahnella sp. WP5 0.89 EX31_RS14205 methylenetetrahydrofolate reductase 0.83 EX31_RS11450 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.87 58
Pectobacterium carotovorum WPP14 0.88 HER17_RS00950 methylenetetrahydrofolate reductase 0.83 HER17_RS12240 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20415 methylenetetrahydrofolate reductase 0.84 HGI48_RS09735 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21460 methylenetetrahydrofolate reductase 0.84 DZA65_RS10045 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.67 38
Erwinia tracheiphila SCR3 0.86 LU632_RS19630 metF methylenetetrahydrofolate reductase 0.83 LU632_RS08935 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 74
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_13560 methylenetetrahydrofolate reductase 0.68 CSW01_05760 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase low > 62
Shewanella loihica PV-4 0.76 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.66 Shew_2200 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.99 3
Shewanella amazonensis SB2B 0.75 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.64 Sama_1944 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.96 28
Shewanella sp. ANA-3 0.75 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.63 Shewana3_1851 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.98 3
Shewanella oneidensis MR-1 0.75 SO4054 metF 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.63 SO2071 hisB imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase (NCBI ptt file) 0.96 24
Alteromonas macleodii MIT1002 0.70 MIT1002_03670 5,10-methylenetetrahydrofolate reductase 0.65 MIT1002_02635 Histidine biosynthesis bifunctional protein HisB low > 70
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.53 Xcc-8004.2946.1 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 74
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.52 OKGIIK_04960 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 52
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H] 0.53 LRK54_RS01595 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS11765 methylenetetrahydrofolate reductase [NAD(P)H] 0.53 LRK55_RS01375 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 63
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] 0.54 ABZR86_RS06720 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.94 37
Lysobacter sp. OAE881 0.34 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] 0.54 ABIE51_RS13315 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS20935 methylenetetrahydrofolate reductase [NAD(P)H] 0.43 ABZR88_RS06870 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 71
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] 0.45 HMPREF1078_RS02440 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_3637 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.44 Echvi_2457 histidinol-phosphatase 0.86 34
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS23445 methylenetetrahydrofolate reductase [NAD(P)H] 0.42 CA265_RS03625 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase 0.94 27
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_16780 methylenetetrahydrofolate reductase [NAD(P)H] 0.47 CA264_05040 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase low > 74
Phocaeicola dorei CL03T12C01 0.19 ABI39_RS15570 methylenetetrahydrofolate reductase [NAD(P)H] 0.44 ABI39_RS11845 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 72
Bacteroides thetaiotaomicron VPI-5482 0.18 BT3821 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.46 BT0203 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS01490 methylenetetrahydrofolate reductase [NAD(P)H] 0.44 HMPREF1058_RS15885 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 67
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS00120 methylenetetrahydrofolate reductase [NAD(P)H] 0.46 HMPREF1181_RS04850 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 56
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03666 methylenetetrahydrofolate reductase (NAD(P)H) 0.46 BACOVA_01232 histidinol-phosphatase low > 94

Not shown: 53 genomes with orthologs for b3941 only; 0 genomes with orthologs for b2022 only