Conservation of cofitness between b3034 and b1854 in Escherichia coli BW25113

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3034 nudF ADP-ribose pyrophosphatase (NCBI) 1.0 b1854 pykA pyruvate kinase (NCBI) 0.33 1
Escherichia coli ECRC101 1.00 OKFHMN_18810 nudF ADP-ribose diphosphatase 1.00 OKFHMN_26320 pyk pyruvate kinase — —
Escherichia coli ECRC98 1.00 JDDGAC_22445 nudF ADP-ribose diphosphatase 1.00 JDDGAC_00895 pyk pyruvate kinase — —
Escherichia coli ECRC99 1.00 KEDOAH_09335 nudF ADP-ribose diphosphatase 1.00 KEDOAH_01785 pyk pyruvate kinase — —
Escherichia fergusonii Becca 1.00 EFB2_00774 ADP-ribose pyrophosphatase 1.00 EFB2_02088 Pyruvate kinase II low > 86
Escherichia coli BL21 1.00 ECD_02906 ADP-ribose pyrophosphatase 1.00 ECD_01825 pyruvate kinase II 0.53 57
Escherichia coli ECRC102 1.00 NIAGMN_16575 nudF ADP-ribose diphosphatase 1.00 NIAGMN_01740 pyk pyruvate kinase — —
Escherichia coli ECRC62 1.00 BNILDI_00900 nudF ADP-ribose diphosphatase 1.00 BNILDI_15630 pyk pyruvate kinase — —
Escherichia coli ECOR38 1.00 HEPCGN_17685 nudF ADP-ribose diphosphatase 1.00 HEPCGN_04725 pyk pyruvate kinase low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17510 ADP-ribose diphosphatase 1.00 ECOLIN_RS10330 pyruvate kinase — —
Escherichia coli ECOR27 1.00 NOLOHH_10615 nudF ADP-ribose diphosphatase 1.00 NOLOHH_16835 pyk pyruvate kinase low > 57
Escherichia coli ECRC101 1.00 MCAODC_09325 nudF ADP-ribose diphosphatase 1.00 MCAODC_19085 pyk pyruvate kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00669 ADP-ribose pyrophosphatase 1.00 OHPLBJKB_01874 Pyruvate kinase II low > 73
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3072 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.98 EX28DRAFT_0702 pyruvate kinase low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03881 ADP-ribose pyrophosphatase 0.98 MPMX20_02759 Pyruvate kinase II low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3148 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.99 GFF1633 Pyruvate kinase (EC 2.7.1.40) low > 78
Klebsiella michiganensis M5al 0.86 BWI76_RS24395 ADP-ribose diphosphatase 0.97 BWI76_RS18115 pyruvate kinase low > 92
Serratia liquefaciens MT49 0.82 IAI46_21940 ADP-ribose diphosphatase 0.93 IAI46_14585 pyruvate kinase low > 86
Rahnella sp. WP5 0.80 EX31_RS08095 ADP-ribose diphosphatase 0.93 EX31_RS10640 pyruvate kinase low > 89
Dickeya dianthicola ME23 0.77 DZA65_RS01715 ADP-ribose diphosphatase 0.90 DZA65_RS10570 pyruvate kinase low > 75
Pantoea sp. MT58 0.77 IAI47_03140 ADP-ribose diphosphatase 0.93 IAI47_08485 pyruvate kinase low > 76
Dickeya dianthicola 67-19 0.77 HGI48_RS01640 ADP-ribose diphosphatase 0.90 HGI48_RS10155 pyruvate kinase 0.64 22
Dickeya dadantii 3937 0.77 DDA3937_RS01745 ADP-ribose diphosphatase 0.90 DDA3937_RS10125 pyruvate kinase low > 74
Erwinia tracheiphila SCR3 0.74 LU632_RS20630 nudF ADP-ribose diphosphatase 0.92 LU632_RS13370 pyk pyruvate kinase low > 74
Pectobacterium carotovorum WPP14 0.72 HER17_RS19820 ADP-ribose diphosphatase 0.92 HER17_RS11790 pyruvate kinase low > 75
Shewanella amazonensis SB2B 0.58 Sama_3047 ADP-ribose diphosphatase (RefSeq) 0.70 Sama_1814 pyruvate kinase (RefSeq) 0.36 18
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_12330 ADP-ribose diphosphatase 0.68 CSW01_10025 pyruvate kinase low > 62
Shewanella loihica PV-4 0.56 Shew_0545 ADP-ribose diphosphatase (RefSeq) 0.69 Shew_2050 pyruvate kinase (RefSeq) — —
Alteromonas macleodii MIT1002 0.55 MIT1002_00671 ADP-ribose pyrophosphatase 0.67 MIT1002_02409 Pyruvate kinase II — —
Shewanella sp. ANA-3 0.54 Shewana3_0726 nucleoside diphosphate pyrophosphatase (RefSeq) 0.70 Shewana3_2153 pyruvate kinase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO3903 MutT/nudix family protein (NCBI ptt file) 0.69 SO2491 pykA pyruvate kinase II (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_0479 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.53 Psest_3190 pyruvate kinase low > 67
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_08795 ADP-ribose pyrophosphatase 0.54 AO356_17830 pyruvate kinase low > 104
Pseudomonas sp. S08-1 0.46 OH686_15835 ADP-ribose pyrophosphatase 0.52 OH686_18800 pyruvate kinase low > 80
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.54 Pf6N2E2_5494 Pyruvate kinase (EC 2.7.1.40) 0.20 73
Pseudomonas sp. RS175 0.46 PFR28_05094 ADP-ribose pyrophosphatase 0.54 PFR28_03455 Pyruvate kinase II low > 88
Pseudomonas fluorescens SBW25 0.46 PFLU_RS02445 NUDIX domain-containing protein 0.54 PFLU_RS24255 pyruvate kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS02445 NUDIX domain-containing protein 0.54 PFLU_RS24255 pyruvate kinase low > 109
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_13025 ADP-ribose pyrophosphatase 0.54 AO353_03775 pyruvate kinase low > 101
Pseudomonas simiae WCS417 0.45 PS417_02370 ADP-ribose pyrophosphatase 0.54 PS417_22620 pyruvate kinase low > 88
Pseudomonas putida KT2440 0.44 PP_4919 ADP-ribose/sugar pyrophosphatase 0.54 PP_1362 pyruvate kinase II low > 96
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_182 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.54 PfGW456L13_1813 Pyruvate kinase (EC 2.7.1.40) low > 87
Marinobacter adhaerens HP15 0.44 HP15_454 nucleoside diphosphate pyrophosphatase 0.57 HP15_2176 pyruvate kinase II low > 73
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1444 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.54 Pf1N1B4_678 Pyruvate kinase (EC 2.7.1.40) low > 87
Magnetospirillum magneticum AMB-1 0.44 AMB_RS06645 NUDIX domain-containing protein 0.32 AMB_RS16010 pyruvate kinase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0547 Conserved hypothetical protein 52 0.53 Psyr_4029 pyruvate kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0547 Conserved hypothetical protein 52 0.53 Psyr_4029 pyruvate kinase low > 86
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0975 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.59 B158DRAFT_1404 pyruvate kinase low > 40
Azospirillum sp. SherDot2 0.37 MPMX19_01327 ADP-ribose pyrophosphatase 0.31 MPMX19_04460 Pyruvate kinase low > 112
Rhodopseudomonas palustris CGA009 0.24 TX73_019105 NUDIX hydrolase 0.31 TX73_021735 pyruvate kinase — —

Not shown: 3 genomes with orthologs for b3034 only; 29 genomes with orthologs for b1854 only