Conservation of cofitness between Rru_A1435 and Rru_A2244 in Rhodospirillum rubrum S1H

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1435 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) 1.0 Rru_A2244 Glycogen/starch/alpha-glucan phosphorylase (NCBI) 0.75 7
Sinorhizobium meliloti 1021 0.62 SM_b20613 C4-dicarboxylate transport transcriptional regulator 0.47 SMc04460 glycogen phosphorylase low > 103
Agrobacterium fabrum C58 0.60 Atu3296 two component response regulator for C4-dicarboxylate transport 0.47 Atu4078 glycogen phosphorylase low > 89
Rhizobium sp. OAE497 0.59 ABIE40_RS26335 sigma-54 dependent transcriptional regulator 0.47 ABIE40_RS16475 glycogen/starch/alpha-glucan phosphorylase low > 107
Azospirillum brasilense Sp245 0.51 AZOBR_RS21130 Fis family transcriptional regulator 0.54 AZOBR_RS14740 glycogen phosphorylase 0.28 75
Escherichia fergusonii Becca 0.50 EFB2_04538 C4-dicarboxylate transport transcriptional regulatory protein DctD 0.50 EFB2_00391 Maltodextrin phosphorylase low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS23460 sigma-54 dependent transcriptional regulator 0.50 ECOLIN_RS19620 glycogen phosphorylase low > 55
Pseudomonas stutzeri RCH2 0.49 Psest_4132 alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) 0.45 Psest_3957 glycogen/starch/alpha-glucan phosphorylases low > 67
Azospirillum sp. SherDot2 0.49 MPMX19_04251 C4-dicarboxylate transport transcriptional regulatory protein DctD 0.53 MPMX19_01194 Maltodextrin phosphorylase low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3995 Helix-turn-helix, Fis-type 0.47 Psyr_0374 Phosphorylase low > 86
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3995 Helix-turn-helix, Fis-type 0.47 Psyr_0374 Phosphorylase low > 86
Pseudomonas sp. S08-1 0.48 OH686_14355 C4-dicarboxylate transport transcriptional regulatory protein 0.47 OH686_01475 Glycogen phosphorylase low > 80
Pseudomonas putida KT2440 0.48 PP_1401 C4-dicarboxylate transport transcriptional regulatory protein 0.47 PP_5041 glycogen phosphorylase low > 96
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_5487 Nitrogen regulation protein NR(I) 0.47 Pf6N2E2_3816 Glycogen phosphorylase (EC 2.4.1.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_17800 C4-dicarboxylate ABC transporter 0.47 AO356_09685 maltodextrin phosphorylase low > 104
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_16265 Fis family transcriptional regulator 0.47 AO353_12190 maltodextrin phosphorylase low > 101
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_401 C4-dicarboxylate transport transcriptional regulatory protein 0.46 PfGW456L13_338 Glycogen phosphorylase (EC 2.4.1.1) low > 87
Paraburkholderia graminis OAS925 0.47 ABIE53_000648 two-component system C4-dicarboxylate transport response regulator DctD 0.50 ABIE53_005130 starch phosphorylase low > 113
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator 0.46 CSW01_14115 glycogen/starch/alpha-glucan phosphorylase 0.49 57
Pseudomonas sp. RS175 0.47 PFR28_03462 C4-dicarboxylate transport transcriptional regulatory protein DctD 0.46 PFR28_04953 Maltodextrin phosphorylase low > 88
Pseudomonas simiae WCS417 0.47 PS417_05535 Fis family transcriptional regulator 0.46 PS417_01675 maltodextrin phosphorylase low > 88
Magnetospirillum magneticum AMB-1 0.47 AMB_RS08380 sigma-54-dependent Fis family transcriptional regulator 0.57 AMB_RS15415 glycogen/starch/alpha-glucan phosphorylase low > 64
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1666 C4-dicarboxylate transport transcriptional regulatory protein 0.46 Pf1N1B4_1599 Glycogen phosphorylase (EC 2.4.1.1) low > 87
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02037 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family 0.50 H281DRAFT_03054 glycogen phosphorylase 0.29 29
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator 0.46 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator 0.46 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS02520 Fis family transcriptional regulator 0.50 BPHYT_RS29590 glycogen phosphorylase low > 109
Shewanella sp. ANA-3 0.46 Shewana3_1412 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.43 Shewana3_2932 glycogen/starch/alpha-glucan phosphorylases (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO3138 dctD C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) 0.42 SO1496 glycogen phosphorylase family protein (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS01375 sigma-54 dependent transcriptional regulator 0.49 QEN71_RS14305 glycogen/starch/alpha-glucan phosphorylase low > 153
Shewanella loihica PV-4 0.45 Shew_1442 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.42 Shew_1170 glycogen/starch/alpha-glucan phosphorylase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_2213 response regulator receiver protein (RefSeq) 0.42 Sama_2451 phosphorylase (RefSeq) low > 62
Variovorax sp. OAS795 0.45 ABID97_RS26605 sigma-54 dependent transcriptional regulator 0.52 ABID97_RS04530 glycogen/starch/alpha-glucan phosphorylase low > 91
Variovorax sp. SCN45 0.43 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake 0.52 GFF7301 Glycogen phosphorylase (EC 2.4.1.1) low > 127

Not shown: 19 genomes with orthologs for Rru_A1435 only; 28 genomes with orthologs for Rru_A2244 only