| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2958 | | extracellular solute-binding protein, family 5 | insig. | 100 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2958 | | extracellular solute-binding protein, family 5 | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS14345 | | ABC transporter substrate-binding protein | insig. | 77 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14345 | | ABC transporter substrate-binding protein | insig. | 77 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS16630 | | ABC transporter substrate-binding protein | insig. | 77 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02869 | | Metal-staphylopine-binding protein CntA | insig. | 75 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS23525 | | ABC transporter substrate-binding protein | no data | 75 | 96 |
| o | Pseudomonas putida KT2440 | PP_3223 | | ABC transporter, periplasmic binding protein | insig. | 72 | 99 |
| o | Dickeya dianthicola 67-19 | HGI48_RS02320 | | ABC transporter substrate-binding protein | insig. | 33 | 90 |
| o | Dickeya dadantii 3937 | DDA3937_RS02365 | | ABC transporter substrate-binding protein | insig. | 33 | 90 |
| o | Dickeya dianthicola ME23 | DZA65_RS02430 | | ABC transporter substrate-binding protein | insig. | 32 | 97 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS19210 | | ABC transporter substrate-binding protein | insig. | 32 | 94 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_22745 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 33 | 87 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08295 | | TIGR04028 family ABC transporter substrate-binding protein | cofit | 32 | 86 |
| o | Klebsiella michiganensis M5al | BWI76_RS13795 | | ABC transporter substrate binding protein | insig. | 31 | 87 |
| o | Rahnella sp. WP5 | EX31_RS24055 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 32 | 87 |
| | Pectobacterium carotovorum WPP14 | HER17_RS21180 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 31 | 87 |
| | Dickeya dadantii 3937 | DDA3937_RS21100 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 34 | 83 |
| | Dickeya dianthicola 67-19 | HGI48_RS00160 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 33 | 83 |
| | Dickeya dianthicola ME23 | DZA65_RS00180 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 32 | 87 |
| o | Serratia liquefaciens MT49 | IAI46_16895 | | TIGR04028 family ABC transporter substrate-binding protein | insig. | 31 | 86 |
| | Pseudomonas sp. SVBP6 | COO64_RS10645 | | ABC transporter substrate-binding protein | insig. | 34 | 73 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_4311 | | ABC-type dipeptide transport system, periplasmic component | insig. | 32 | 81 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1098 | | ABC transporter substrate binding protein, KPN_01854 family | insig. | 30 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37895 | | ABC transporter substrate-binding protein | insig. | 32 | 78 |
| | Rhodopseudomonas palustris CGA009 | TX73_012035 | | ABC transporter substrate-binding protein | cofit | 27 | 83 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23015 | | peptide ABC transporter substrate-binding protein | insig. | 27 | 78 |
| o | Bosea sp. OAE506 | ABIE41_RS23730 | | ABC transporter substrate-binding protein | insig. | 26 | 88 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01030 | | peptide/nickel transport system substrate-binding protein | insig. | 26 | 93 |
| | Rahnella sp. WP5 | EX31_RS00065 | | ABC transporter substrate-binding protein | insig. | 27 | 86 |
| | Bifidobacterium breve UCC2003 | BBR_RS13115 | | Solute-binding protein of ABC transporter system for peptide | no data | 26 | 86 |
| | Rahnella sp. WP5 | EX31_RS02025 | | ABC transporter substrate-binding protein | insig. | 26 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_006348 | | peptide/nickel transport system substrate-binding protein | insig. | 25 | 94 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23595 | | ABC transporter substrate-binding protein | insig. | 27 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS16680 | | ABC transporter substrate-binding protein | sig. | 27 | 86 |
| | Alteromonas macleodii MIT1002 | MIT1002_02934 | | Nickel-binding periplasmic protein precursor | insig. | 26 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS07280 | | nickel ABC transporter, nickel/metallophore periplasmic binding protein | insig. | 27 | 68 |
| | Pseudomonas segetis P6 | MPMX49_00020 | | Periplasmic dipeptide transport protein | insig. | 25 | 87 |
| | Rhizobium sp. OAE497 | ABIE40_RS24120 | | ABC transporter substrate-binding protein | insig. | 26 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS02550 | | ABC transporter substrate-binding protein | insig. | 26 | 87 |
| | Pantoea sp. MT58 | IAI47_11340 | | glutathione ABC transporter substrate-binding protein | insig. | 27 | 87 |
| | Pseudomonas sp. S08-1 | OH686_13625 | | ABC transporter, periplasmic substrate-binding protein | insig. | 26 | 78 |
| | Dickeya dadantii 3937 | DDA3937_RS02225 | | ABC transporter substrate-binding protein | insig. | 27 | 79 |
| | Azospirillum brasilense Sp245 | AZOBR_RS02325 | | ABC transporter substrate-binding protein | sig. | 30 | 69 |
| | Dickeya dadantii 3937 | DDA3937_RS06935 | | ABC transporter substrate-binding protein | insig. | 25 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_12550 | | peptide ABC transporter substrate-binding protein | sig. | 25 | 78 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17265 | | glutathione ABC transporter substrate-binding protein | insig. | 27 | 87 |
| | Fusobacterium nucleatum SB010 | HUW76_09275 | | nickel ABC transporter, nickel/metallophore periplasmic binding protein | cofit | 25 | 80 |
| | Xanthobacter sp. DMC5 | GFF793 | | Oligopeptide-binding protein AppA | insig. | 27 | 88 |
| | Agrobacterium fabrum C58 | Atu4525 | | oligopeptide ABC transporter substrate-binding protein | insig. | 27 | 60 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01150 | | ABC transporter substrate-binding protein | insig. | 25 | 87 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25295 | | ABC transporter substrate-binding protein | insig. | 27 | 83 |
| | Variovorax sp. SCN45 | GFF4131 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 27 | 70 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08445 | | ABC transporter substrate-binding protein | strong | 26 | 87 |
| | Variovorax sp. OAS795 | ABID97_RS23795 | | ABC transporter substrate-binding protein | insig. | 26 | 85 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02084 | | dipeptide transport system substrate-binding protein | insig. | 26 | 87 |
| | Sinorhizobium meliloti 1021 | SM_b20476 | | peptide ABC transporter substrate-binding protein | insig. | 26 | 88 |
| | Pseudomonas sp. RS175 | PFR28_04411 | | Periplasmic dipeptide transport protein | cofit | 26 | 67 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS04200 | | glutathione ABC transporter substrate-binding protein GsiB | cofit | 24 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS08055 | | ABC transporter substrate-binding protein | insig. | 26 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08055 | | ABC transporter substrate-binding protein | insig. | 26 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | insig. | 25 | 87 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4823 | | Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein | strong | 26 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02265 | | peptide ABC transporter substrate-binding protein | insig. | 26 | 87 |
| | Pseudomonas simiae WCS417 | PS417_11130 | | peptide ABC transporter substrate-binding protein | insig. | 26 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23915 | | ABC transporter substrate-binding protein | insig. | 25 | 89 |
| | Pseudomonas simiae WCS417 | PS417_08085 | | diguanylate cyclase | insig. | 26 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02755 | | Periplasmic dipeptide transport protein | insig. | 27 | 69 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26865 | | putative di/tripeptide-binding protein 5 | strong | 25 | 84 |
| | Pseudomonas orientalis W4I3 | QF045_RS10805 | | ABC transporter substrate-binding protein | cofit | 26 | 94 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00220 | | ABC transporter substrate-binding protein | cofit | 25 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS19180 | | diguanylate cyclase | insig. | 24 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS21960 | | ABC transporter substrate-binding protein | insig. | 24 | 94 |
| | Escherichia coli ECRC100 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli ECRC101 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli ECRC102 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | cofit | 27 | 64 |
| | Escherichia coli ECRC98 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli ECRC99 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | no data | 27 | 64 |
| | Serratia liquefaciens MT49 | IAI46_13525 | | peptide ABC transporter substrate-binding protein SapA | no data | 26 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_02825 | | Oligopeptide-binding protein AppA | insig. | 26 | 83 |
| | Pseudomonas simiae WCS417 | PS417_27765 | | peptide ABC transporter substrate-binding protein | sig. | 25 | 87 |
| | Escherichia coli BL21 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | insig. | 27 | 64 |
| | Escherichia fergusonii Becca | EFB2_00263 | | Periplasmic dipeptide transport protein | insig. | 27 | 64 |
| | Escherichia coli ECOR27 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli ECOR38 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli ECRC62 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | insig. | 27 | 64 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | insig. | 27 | 64 |
| | Escherichia coli BW25113 | b3544 | dppA | dipeptide transporter (NCBI) | sig. | 27 | 64 |
| | Dickeya dianthicola ME23 | DZA65_RS07260 | | ABC transporter substrate-binding protein | insig. | 24 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31485 | | ABC transporter substrate-binding protein | insig. | 26 | 93 |
| | Serratia liquefaciens MT49 | IAI46_15400 | | ABC transporter substrate-binding protein | insig. | 27 | 65 |
| | Pantoea sp. MT58 | IAI47_13125 | | glutathione ABC transporter substrate-binding protein GsiB | insig. | 24 | 89 |
| | Xanthobacter sp. DMC5 | GFF797 | | Periplasmic dipeptide transport protein | insig. | 28 | 84 |
| | Fusobacterium nucleatum SB010 | HUW76_03515 | | glutathione ABC transporter substrate-binding protein | strong | 26 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04115 | | ABC transporter substrate-binding protein | insig. | 27 | 66 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04115 | | ABC transporter substrate-binding protein | insig. | 27 | 66 |
| | Dickeya dianthicola 67-19 | HGI48_RS06915 | | ABC transporter substrate-binding protein | insig. | 25 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS10835 | | ABC transporter substrate-binding protein | insig. | 24 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4211 | | extracellular solute-binding protein, family 5 | insig. | 26 | 94 |