Homologs of Pf6N2E2_21 from Pseudomonas fluorescens FW300-N2E2

Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis
SEED: Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 100 100
o Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 97 98
o Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 97 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 89 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 87 99
o Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 85 99
o Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 84 100
o Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 84 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 84 100
o Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 84 100
o Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 76 99
o Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 68 99
o Pseudomonas aeruginosa MRSN321 DY961_RS18335 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 72 99
o Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI sig. 72 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS59570 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 72 99
o Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 62 98
o Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 47 94
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 44 94
o Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 45 96
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 44 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 44 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 43 94
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 43 94
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 42 94
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 42 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 42 94
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 42 94
o Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 42 98
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 42 93
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 40 93
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 39 92
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 43 96
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 39 95
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 38 96
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 38 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 38 96
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 38 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 38 95
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 37 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 44 94
o Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 44 94
o Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 44 92
o Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 44 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 38 94
o Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 43 96
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 37 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 38 94
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 36 97
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 36 94
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 35 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 35 94
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 37 94
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 38 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 38 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 36 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 34 97
o Methylophilus sp. DMC18 GFF1870 hypothetical protein insig. 32 91
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 38 87
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 38 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 38 94
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 37 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 38 94
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 36 93
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 40 94
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 37 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04645 sigma-70 family RNA polymerase sigma factor cofit 34 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 40 87
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 37 94
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 36 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 38 87
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 38 94
o Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 33 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2942 RNA polymerase sigma factor, sigma-70 family insig. 37 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 34 96
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 38 87
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 37 94
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 35 92
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 33 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 38 87
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 36 93
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 35 94
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 38 87
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 38 89
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 36 87
o Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 38 88
  Pseudomonas sp. DMC3 GFF4294 putative RNA polymerase sigma factor FecI insig. 36 95
  Pseudomonas putida KT2440 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily sig. 38 95
  Pseudomonas sp. SVBP6 COO64_RS15350 sigma-70 family RNA polymerase sigma factor insig. 38 87
  Pseudomonas sp. BP01 JOY50_RS24800 sigma-70 family RNA polymerase sigma factor insig. 37 99
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 37 87
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 35 94
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 89
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 34 91
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 34 94
  Pseudomonas sp. BP01 JOY50_RS28195 sigma-70 family RNA polymerase sigma factor no data 38 95
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 33 94
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 37 90
  Pseudomonas simiae WCS417 PS417_12935 RNA polymerase sigma factor insig. 37 93
  Pseudomonas aeruginosa MRSN321 DY961_RS13375 sigma-70 family RNA polymerase sigma factor insig. 35 94
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma sig. 35 94