Homologs of PFLU_RS26350 from Pseudomonas fluorescens SBW25-INTG

RNA polymerase sigma factor
SEED: FIG006045: Sigma factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 100 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 100 100
o Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 98 100
o Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 48 92
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 40 91
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 39 91
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 35 91
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 39 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 39 90
o Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 38 87
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 37 92
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 38 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 35 88
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 36 94
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 37 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 37 91
  Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 34 89
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 35 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 33 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 37 92
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 34 90
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 33 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 40 77
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 34 88
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 33 90
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 33 90
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 33 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 33 92
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 32 90
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 36 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 36 91
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 37 86
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 35 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 35 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 34 94
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 35 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 33 86
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 32 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 32 90
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 33 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 33 88
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 36 86
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 34 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 34 88
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 35 86
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 34 88
o Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 37 84
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 34 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 88
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 31 89
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 32 94
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 33 88
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 32 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 31 89
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 32 90
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 29 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 32 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 31 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 32 86
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 32 88
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 34 96
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 79
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 31 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3549 RNA polymerase sigma factor, sigma-70 family insig. 31 92
  Variovorax sp. SCN45 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 88
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 31 90
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 30 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 28 86
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 35 87
  Pseudomonas putida KT2440 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily sig. 30 87
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 33 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 28 91
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 31 89
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 29 89
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 32 90
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 26 92
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 33 87
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 31 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00265 RNA polymerase sigma-70 factor insig. 29 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 37 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 36 88
  Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 32 83
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 32 85
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 31 89
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 29 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 32 89
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 88
  Rhodopseudomonas palustris CGA009 TX73_012350 RNA polymerase sigma factor insig. 35 82
  Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 32 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 32 92
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 33 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 32 85
  Variovorax sp. SCN45 GFF1723 Extracytoplasmic function (ECF) sigma factor VreI no data 30 92
  Dechlorosoma suillum PS Dsui_2165 RNA polymerase sigma factor, sigma-70 family no data 37 90
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 32 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2942 RNA polymerase sigma factor, sigma-70 family insig. 35 86