Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Rhodanobacter sp. FW510-T8 | OKGIIK_08945 | | Integrase | insig. | 100 | 100 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2832 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 60 | 100 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2832 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 60 | 100 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2846 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | sig. | 60 | 100 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2846 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | sig. | 60 | 100 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_27450 | | integrase | insig. | 40 | 98 |
o | Pseudomonas putida KT2440 | PP_3920 | | putative Phage integrase | insig. | 40 | 96 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2757 | | Integrase | insig. | 39 | 96 |
| Pseudomonas putida KT2440 | PP_3987 | | Site-specific recombinase, phage integrase family | insig. | 42 | 90 |
| Escherichia coli ECOR38 | HEPCGN_03620 | xerD | integrase | insig. | 32 | 75 |
| Escherichia coli ECRC100 | OKFHMN_25220 | xerD | integrase | cofit | 31 | 75 |
| Escherichia coli ECRC101 | MCAODC_20170 | xerD | integrase | insig. | 31 | 75 |
| Escherichia coli ECRC102 | NIAGMN_22725 | xerD | integrase | insig. | 31 | 75 |
| Escherichia coli ECRC98 | JDDGAC_29350 | xerD | integrase | cofit | 31 | 75 |
| Escherichia coli ECRC99 | KEDOAH_02875 | xerD | integrase | no data | 31 | 75 |
o | Shewanella loihica PV-4 | Shew_0995 | | phage integrase family protein (RefSeq) | insig. | 31 | 92 |
| Dickeya dianthicola 67-19 | HGI48_RS08260 | | tyrosine-type recombinase/integrase | insig. | 31 | 64 |
| Escherichia coli ECRC100 | OKFHMN_05160 | | integrase | insig. | 30 | 75 |
| Escherichia coli ECRC102 | NIAGMN_02880 | | integrase | insig. | 30 | 75 |
| Escherichia coli ECRC99 | KEDOAH_22575 | | integrase | no data | 30 | 75 |
| Escherichia coli ECRC98 | JDDGAC_08770 | | integrase | cofit | 30 | 75 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2888 | | Mobile element protein | sig. | 54 | 20 |
o | Variovorax sp. OAS795 | ABID97_RS15035 | | tyrosine-type recombinase/integrase | insig. | 27 | 90 |
| Escherichia coli ECRC101 | MCAODC_24550 | | Integrase from prophage | insig. | 29 | 54 |
| Escherichia coli ECRC100 | OKFHMN_06645 | int | Integrase | cofit | 30 | 68 |
| Escherichia coli ECRC102 | NIAGMN_04695 | int | Integrase | insig. | 30 | 68 |
| Escherichia coli ECRC98 | JDDGAC_10300 | int | Integrase | insig. | 30 | 68 |
| Escherichia coli ECRC101 | MCAODC_25865 | int | Integrase | insig. | 28 | 79 |
| Escherichia coli ECRC99 | KEDOAH_21320 | int | Integrase | no data | 28 | 79 |
| Escherichia coli ECOR27 | NOLOHH_23070 | int | Integrase | insig. | 28 | 79 |
| Escherichia coli ECRC100 | OKFHMN_02750 | | Tyr recombinase domain-containing protein | cofit | 30 | 58 |
| Escherichia coli ECRC102 | NIAGMN_27220 | | Tyr recombinase domain-containing protein | insig. | 30 | 58 |
| Escherichia coli ECRC98 | JDDGAC_05285 | | Tyr recombinase domain-containing protein | cofit | 30 | 58 |
| Escherichia coli ECRC99 | KEDOAH_26000 | | Tyr recombinase domain-containing protein | no data | 30 | 58 |
| Pseudomonas putida KT2440 | PP_1532 | | putative Phage integrase | insig. | 30 | 59 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c25840 | | phase integrase-like protein | insig. | 25 | 93 |
| Shewanella oneidensis MR-1 | SOA0044 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 26 | 65 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13625 | | integrase | insig. | 32 | 41 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS06645 | | hypothetical protein | insig. | 27 | 43 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1617 | | Mobile element protein | insig. | 28 | 66 |
| Ralstonia solanacearum UW163 | UW163_RS11435 | | site-specific integrase | insig. | 28 | 70 |
| Azospirillum sp. SherDot2 | MPMX19_02643 | | Tyrosine recombinase XerD | no data | 27 | 65 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04775 | | integrase | insig. | 30 | 44 |
| Lysobacter sp. OAE881 | ABIE51_RS04495 | | site-specific tyrosine recombinase XerD | strong | 28 | 62 |
| Escherichia coli ECOR38 | HEPCGN_25165 | | integrase | insig. | 51 | 14 |
| Escherichia coli ECRC100 | OKFHMN_28700 | | integrase | cofit | 51 | 14 |
| Escherichia coli ECRC101 | MCAODC_21560 | | integrase | insig. | 51 | 14 |
| Escherichia coli ECRC102 | NIAGMN_27160 | | integrase | no data | 51 | 14 |
| Escherichia coli ECRC102 | NIAGMN_27535 | | integrase | no data | 51 | 14 |
| Escherichia coli ECRC99 | KEDOAH_25695 | | integrase | no data | 51 | 14 |
| Pseudomonas sp. RS175 | PFR28_02716 | | hypothetical protein | insig. | 29 | 59 |
| Escherichia fergusonii Becca | EFB2_02106 | | hypothetical protein | insig. | 27 | 76 |
| Azospirillum brasilense Sp245 | AZOBR_RS24420 | | integrase | insig. | 27 | 58 |
| Bifidobacterium breve UCC2003 | BBR_RS16655 | | tyrosine recombinase XerC | strong | 29 | 40 |
| Escherichia coli ECRC98 | JDDGAC_05875 | | integrase | insig. | 49 | 14 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4549 | | integrase (NCBI ptt file) | insig. | 25 | 68 |
| Rahnella sp. WP5 | EX31_RS17115 | | tyrosine-type recombinase/integrase | insig. | 30 | 45 |
| Dinoroseobacter shibae DFL-12 | Dshi_3700 | | integrase family protein (RefSeq) | insig. | 30 | 42 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4441.1 | | Tyrosine recombinase XerD | sig. | 30 | 41 |
| Pantoea sp. MT58 | IAI47_18400 | | tyrosine recombinase XerC | sig. | 25 | 72 |
| Serratia liquefaciens MT49 | IAI46_00725 | | tyrosine recombinase XerC | insig. | 25 | 72 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_27150 | | hypothetical protein | insig. | 30 | 31 |
| Phaeobacter inhibens DSM 17395 | PGA1_c30760 | | putative phage integrase | insig. | 25 | 62 |
| Rhodospirillum rubrum S1H | Rru_A1741 | | Phage integrase (NCBI) | cofit | 26 | 39 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_12250 | | site-specific tyrosine recombinase XerD | strong | 28 | 41 |
| Azospirillum brasilense Sp245 | AZOBR_RS03240 | | recombinase XerD | insig. | 26 | 40 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF547 | | Tyrosine recombinase XerC | sig. | 24 | 73 |
| Dinoroseobacter shibae DFL-12 | Dshi_0988 | | integrase family protein (RefSeq) | cofit | 24 | 42 |
| Erwinia tracheiphila SCR3 | LU632_RS14550 | | site-specific integrase | insig. | 47 | 15 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09795 | | integrase | insig. | 29 | 42 |
| Agrobacterium fabrum C58 | Atu0438 | | phage-related integrase | sig. | 26 | 46 |
| Mycobacterium tuberculosis H37Rv | Rv2894c | | Probable integrase/recombinase XerC | no data | 27 | 69 |
| Phaeobacter inhibens DSM 17395 | PGA1_c14060 | | tyrosine recombinase XerD | strong | 26 | 63 |
| Escherichia coli BW25113 | b1140 | intE | e14 prophage; predicted integrase (NCBI) | sig. | 53 | 13 |
| Escherichia coli ECRC100 | OKFHMN_00765 | int | Integrase | cofit | 28 | 42 |
| Escherichia coli ECRC101 | MCAODC_22320 | int | Integrase | insig. | 28 | 42 |
| Escherichia coli ECRC102 | NIAGMN_24910 | int | Integrase | no data | 28 | 42 |
| Escherichia coli ECRC98 | JDDGAC_06600 | int | Integrase | cofit | 28 | 42 |
| Escherichia coli ECRC99 | KEDOAH_24850 | int | Integrase | no data | 28 | 42 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1508 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 27 | 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1508 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 27 | 75 |
| Erwinia tracheiphila SCR3 | LU632_RS05975 | xerD | site-specific tyrosine recombinase XerD | no data | 26 | 44 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09715 | | hypothetical protein | insig. | 28 | 38 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1475 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 24 | 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1475 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 24 | 75 |
| Escherichia fergusonii Becca | EFB2_02838 | | hypothetical protein | insig. | 28 | 42 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2945 | | tyrosine recombinase XerD | insig. | 27 | 44 |
| Phaeobacter inhibens DSM 17395 | PGA1_c22660 | | putative phage integrase protein | insig. | 26 | 80 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01440 | | tyrosine-type recombinase/integrase | insig. | 24 | 94 |
| Variovorax sp. OAS795 | ABID97_RS06150 | | tyrosine recombinase XerC | sig. | 24 | 73 |
| Erwinia tracheiphila SCR3 | LU632_RS24135 | xerC | tyrosine recombinase XerC | no data | 23 | 72 |
| Lysobacter sp. OAE881 | ABIE51_RS12320 | | site-specific integrase | insig. | 26 | 58 |
| Klebsiella michiganensis M5al | BWI76_RS01210 | | tyrosine recombinase XerC | strong | 24 | 72 |
| Pectobacterium carotovorum WPP14 | HER17_RS01350 | | tyrosine recombinase XerC | strong | 24 | 58 |
| Bacteroides stercoris CC31F | HMPREF1181_RS10985 | | site-specific integrase | insig. | 25 | 40 |
| Dickeya dianthicola 67-19 | HGI48_RS20045 | | tyrosine recombinase XerC | strong | 24 | 72 |
| Dickeya dianthicola ME23 | DZA65_RS21090 | | tyrosine recombinase XerC | insig. | 24 | 72 |
| Escherichia coli ECRC102 | NIAGMN_17335 | xerD | site-specific tyrosine recombinase XerD | no data | 26 | 44 |
| Mycobacterium tuberculosis H37Rv | Rv2646 | | Probable integrase | insig. | 27 | 46 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1492 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 25 | 65 |