Homologs of MMJJ_RS06675 from Methanococcus maripaludis JJ

TIGR01212 family radical SAM protein
SEED: COG1242: Predicted Fe-S oxidoreductase

67 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis JJ MMJJ_RS06675 TIGR01212 family radical SAM protein strong 100 100
o Methanococcus maripaludis S2 MMP_RS07685 TIGR01212 family radical SAM protein strong 95 100
o Fusobacterium nucleatum SB010 HUW76_06060 TIGR01212 family radical SAM protein cofit 37 86
o Serratia liquefaciens MT49 IAI46_22340 TIGR01212 family radical SAM protein insig. 32 91
o Klebsiella michiganensis M5al BWI76_RS25305 TIGR01212 family radical SAM protein insig. 34 85
o Enterobacter asburiae PDN3 EX28DRAFT_3274 radical SAM protein, TIGR01212 family insig. 33 86
o Klebsiella pneumoniae MKP103 KDGMDA_06140 TIGR01212 family radical SAM protein insig. 33 87
o Klebsiella pneumoniae MRSN742743 GJGHJB_00484 yhcC TIGR01212 family radical SAM protein insig. 33 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2819 conserved hypothetical radical SAM protein (RefSeq) insig. 33 88
o Bacteroides ovatus ATCC 8483 BACOVA_04934 radical SAM protein, TIGR01212 family insig. 36 89
o Phocaeicola dorei CL03T12C01 ABI39_RS10115 TIGR01212 family radical SAM protein insig. 35 87
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14495 TIGR01212 family radical SAM protein sig. 35 87
o Escherichia coli ECOR27 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein insig. 32 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16795 TIGR01212 family radical SAM protein insig. 33 89
o Escherichia coli BL21 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein insig. 32 90
o Escherichia coli ECRC100 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein cofit 32 90
o Escherichia coli ECRC101 MCAODC_08410 yhcC TIGR01212 family radical SAM protein insig. 32 90
o Escherichia coli ECRC102 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein insig. 32 90
o Escherichia coli ECRC62 BNILDI_01845 yhcC TIGR01212 family radical SAM protein insig. 32 90
o Escherichia coli ECRC98 JDDGAC_21515 yhcC TIGR01212 family radical SAM protein insig. 32 90
o Escherichia coli ECRC99 KEDOAH_10260 yhcC TIGR01212 family radical SAM protein no data 32 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00489 hypothetical protein insig. 32 90
o Escherichia coli BW25113 b3211 yhcC predicted Fe-S oxidoreductase (NCBI) insig. 32 90
o Dickeya dadantii 3937 DDA3937_RS01670 TIGR01212 family radical SAM protein insig. 30 90
o Bacteroides thetaiotaomicron VPI-5482 BT4125 conserved hypothetical protein (NCBI ptt file) sig. 35 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2955 COG1242: Predicted Fe-S oxidoreductase insig. 32 89
o Escherichia coli ECOR38 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein insig. 31 90
o Escherichia fergusonii Becca EFB2_00612 hypothetical protein insig. 31 90
o Enterobacter sp. TBS_079 MPMX20_04125 hypothetical protein insig. 32 86
o Vibrio cholerae E7946 ATCC 55056 CSW01_12015 TIGR01212 family radical SAM protein insig. 33 88
o Dickeya dianthicola 67-19 HGI48_RS01565 TIGR01212 family radical SAM protein insig. 30 90
o Escherichia coli Nissle 1917 ECOLIN_RS18470 TIGR01212 family radical SAM protein insig. 31 90
o Dickeya dianthicola ME23 DZA65_RS01640 TIGR01212 family radical SAM protein insig. 30 90
o Bacteroides stercoris CC31F HMPREF1181_RS08775 TIGR01212 family radical SAM protein insig. 33 89
o Shewanella loihica PV-4 Shew_1033 putative radical SAM protein (RefSeq) insig. 32 88
o Pectobacterium carotovorum WPP14 HER17_RS19905 TIGR01212 family radical SAM protein cofit 30 90
  Shewanella sp. ANA-3 Shewana3_3048 putative radical SAM protein (RefSeq) insig. 32 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04765 TIGR01212 family radical SAM protein insig. 33 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU0790 radical SAM protein, TIGR01212 family (TIGR) insig. 32 89
  Shewanella oneidensis MR-1 SO1326 conserved hypothetical protein (NCBI ptt file) insig. 31 91
  Shewanella amazonensis SB2B Sama_0858 hypothetical protein (RefSeq) insig. 30 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14980 TIGR01212 family radical SAM protein insig. 32 90
  Fusobacterium nucleatum SB010 HUW76_02255 radical SAM protein cofit 31 64
  Methanococcus maripaludis S2 MMP_RS08110 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 no data 27 46
  Methanococcus maripaludis JJ MMJJ_RS06255 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 strong 27 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU0394 radical SAM domain protein (TIGR) no data 25 64
  Bacteroides thetaiotaomicron VPI-5482 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) sig. 24 64
  Bacteroides stercoris CC31F HMPREF1181_RS06440 radical SAM family heme chaperone HemW cofit 24 64
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11035 radical SAM family heme chaperone HemW cofit 26 52
  Fusobacterium nucleatum SB010 HUW76_01555 coproporphyrinogen III oxidase cofit 28 43
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07680 radical SAM family heme chaperone HemW sig. 24 52
  Fusobacterium nucleatum SB010 HUW76_07285 radical SAM family heme chaperone HemW cofit 29 53
  Phocaeicola dorei CL03T12C01 ABI39_RS00100 radical SAM family heme chaperone HemW cofit 25 42
  Bacteroides ovatus ATCC 8483 BACOVA_03177 putative oxygen-independent coproporphyrinogen III oxidase insig. 22 52
  Fusobacterium nucleatum SB010 HUW76_04695 coproporphyrinogen III oxidase family protein cofit 28 41
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18155 coproporphyrinogen III oxidase sig. 27 43
  Pectobacterium carotovorum WPP14 HER17_RS07230 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 26 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16765 coproporphyrinogen III oxidase sig. 23 66
  Azospirillum sp. SherDot2 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 29 24
  Agrobacterium fabrum C58 Atu0325 oxygen-independent coproporphyrinogen III oxidase no data 23 56
  Rhodopseudomonas palustris CGA009 TX73_008575 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase no data 24 51
  Rhodopseudomonas palustris CGA009 TX73_023400 radical SAM protein insig. 22 67
  Burkholderia phytofirmans PsJN BPHYT_RS10915 radical SAM protein insig. 27 33
  Cellulophaga baltica 18 M666_RS07265 radical SAM family heme chaperone HemW insig. 24 48
  Magnetospirillum magneticum AMB-1 AMB_RS04045 B12-binding domain-containing radical SAM protein cofit 26 33
  Methanococcus maripaludis JJ MMJJ_RS05200 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 28 26
  Rhizobium sp. OAE497 ABIE40_RS13920 radical SAM protein cofit 20 67