Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Herbaspirillum seropedicae SmR1 | HSERO_RS22030 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS21585 | | LysR family transcriptional regulator | insig. | 52 | 96 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS08750 | | LysR family transcriptional regulator | insig. | 49 | 96 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02727 | | transcriptional regulator, LysR family | insig. | 51 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29365 | | LysR family transcriptional regulator | insig. | 46 | 97 |
o | Paraburkholderia graminis OAS925 | ABIE53_005455 | | DNA-binding transcriptional LysR family regulator | insig. | 49 | 96 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1808 | | Transcriptional regulator | insig. | 45 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2268 | | transcriptional regulator, LysR family | insig. | 47 | 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2268 | | transcriptional regulator, LysR family | insig. | 47 | 96 |
| Pseudomonas sp. RS175 | PFR28_00053 | | HTH-type transcriptional regulator GltC | insig. | 46 | 96 |
o | Dickeya dianthicola ME23 | DZA65_RS05745 | | LysR family transcriptional regulator | insig. | 45 | 98 |
o | Dickeya dadantii 3937 | DDA3937_RS05360 | | LysR family transcriptional regulator | insig. | 45 | 98 |
o | Rahnella sp. WP5 | EX31_RS09710 | | LysR family transcriptional regulator | insig. | 42 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS25460 | | LysR family transcriptional regulator | no data | 45 | 97 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS17140 | | LysR family transcriptional regulator | insig. | 45 | 96 |
o | Pectobacterium carotovorum WPP14 | HER17_RS09960 | | LysR family transcriptional regulator | insig. | 43 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS02350 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1011 | | Transcriptional regulator, LysR family | insig. | 43 | 96 |
| Dickeya dadantii 3937 | DDA3937_RS02255 | | LysR family transcriptional regulator | insig. | 39 | 100 |
o | Dickeya dianthicola 67-19 | HGI48_RS02210 | | LysR family transcriptional regulator | insig. | 38 | 100 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS15960 | | LysR family transcriptional regulator | insig. | 41 | 96 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05990 | | DNA-binding transcriptional regulator, LysR family | no data | 42 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS41555 | | LysR family transcriptional regulator | insig. | 41 | 95 |
| Dickeya dadantii 3937 | DDA3937_RS03750 | | LysR family transcriptional regulator | insig. | 42 | 97 |
o | Variovorax sp. SCN45 | GFF2994 | | Transcriptional regulator, LysR family | insig. | 44 | 95 |
o | Variovorax sp. OAS795 | ABID97_RS10080 | | LysR family transcriptional regulator | insig. | 44 | 95 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS36055 | | LysR family transcriptional regulator | insig. | 44 | 95 |
| Variovorax sp. SCN45 | GFF668 | | Transcriptional regulator, LysR family | insig. | 40 | 96 |
o | Pantoea sp. MT58 | IAI47_09650 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| Variovorax sp. OAS795 | ABID97_RS05460 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| Ralstonia solanacearum PSI07 | RPSI07_RS03240 | | LysR family transcriptional regulator | insig. | 43 | 96 |
| Acidovorax sp. GW101-3H11 | Ac3H11_774 | | Transcriptional regulator, LysR family | insig. | 42 | 95 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS21860 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01566 | | DNA-binding transcriptional regulator, LysR family | insig. | 40 | 95 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2625 | | Chromosome initiation inhibitor | insig. | 39 | 98 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3621 | | Transcriptional regulator, LysR family | insig. | 36 | 95 |
| Variovorax sp. SCN45 | GFF5231 | | Transcriptional regulator, LysR family | no data | 34 | 96 |
| Bosea sp. OAE506 | ABIE41_RS01640 | | LysR substrate-binding domain-containing protein | insig. | 32 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS27455 | | transcriptional regulator | no data | 33 | 94 |
| Rhizobium sp. OAE497 | ABIE40_RS00940 | | LysR substrate-binding domain-containing protein | insig. | 38 | 73 |
o | Agrobacterium fabrum C58 | Atu4437 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26320 | | LysR family transcriptional regulator | insig. | 35 | 75 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3609 | | Transcriptional regulator, LysR family | insig. | 37 | 65 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3526 | | transcriptional regulator, LysR family | insig. | 34 | 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3526 | | transcriptional regulator, LysR family | insig. | 34 | 75 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04800 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| Variovorax sp. SCN45 | GFF3436 | | Transcriptional regulator, LysR family | insig. | 30 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS07295 | | LysR family transcriptional regulator | insig. | 31 | 89 |
| Paraburkholderia graminis OAS925 | ABIE53_004398 | | DNA-binding transcriptional LysR family regulator | sig. | 32 | 91 |
| Pseudomonas stutzeri RCH2 | Psest_1438 | | Transcriptional regulator | insig. | 35 | 66 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05029 | | DNA-binding transcriptional regulator, LysR family | no data | 33 | 81 |
| Variovorax sp. SCN45 | GFF2698 | | Transcriptional regulator, LysR family | insig. | 34 | 62 |
| Paraburkholderia graminis OAS925 | ABIE53_002635 | | DNA-binding transcriptional LysR family regulator | strong | 30 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03809 | | transcriptional regulator, LysR family | insig. | 34 | 67 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31250 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS20345 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| Pseudomonas fluorescens SBW25 | PFLU_RS09905 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS09905 | | LysR family transcriptional regulator | sig. | 28 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30615 | | LysR family transcriptional regulator | no data | 31 | 81 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31190 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| Paraburkholderia graminis OAS925 | ABIE53_004438 | | DNA-binding transcriptional LysR family regulator | insig. | 30 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS07690 | | LysR family transcriptional regulator | no data | 28 | 93 |
| Pseudomonas simiae WCS417 | PS417_10830 | | LysR family transcriptional regulator | no data | 27 | 98 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2671 | | transcriptional regulator, LysR family | insig. | 31 | 65 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2671 | | transcriptional regulator, LysR family | insig. | 31 | 65 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22980 | | LysR family transcriptional regulator | no data | 31 | 81 |
| Escherichia coli BW25113 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 29 | 61 |
| Escherichia coli ECOR27 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | cofit | 28 | 61 |
| Escherichia fergusonii Becca | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 61 |
| Escherichia coli ECOR38 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | cofit | 28 | 61 |
| Escherichia coli ECRC101 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 61 |
| Escherichia coli ECRC101 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 61 |
| Escherichia coli ECRC102 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 61 |
| Escherichia coli ECRC62 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 61 |
| Escherichia coli ECRC98 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | no data | 28 | 61 |
| Escherichia coli ECRC99 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | no data | 28 | 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02945 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 61 |
| Escherichia coli Nissle 1917 | ECOLIN_RS04090 | | LysR family transcriptional regulator | no data | 28 | 61 |
| Pseudomonas simiae WCS417 | PS417_06925 | | LysR family transcriptional regulator | insig. | 38 | 59 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4549 | | Transcriptional regulators, LysR family | insig. | 37 | 59 |
| Escherichia coli ECOR38 | HEPCGN_07455 | cynR | transcriptional regulator CynR | cofit | 29 | 97 |
| Escherichia coli ECOR27 | NOLOHH_01740 | cynR | transcriptional regulator CynR | cofit | 28 | 97 |
| Azospirillum sp. SherDot2 | MPMX19_02886 | | HTH-type transcriptional regulator CynR | insig. | 32 | 69 |
| Variovorax sp. SCN45 | GFF6826 | | Transcriptional regulator, LysR family | no data | 30 | 93 |
| Escherichia coli ECRC62 | BNILDI_23155 | cynR | transcriptional regulator CynR | insig. | 29 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03333 | | HTH-type transcriptional regulator CynR | insig. | 29 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2110 | | LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase | insig. | 28 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_27930 | | LysR family transcriptional regulator | strong | 27 | 96 |
| Dickeya dadantii 3937 | DDA3937_RS07805 | | LysR family transcriptional regulator | insig. | 29 | 61 |
| Variovorax sp. OAS795 | ABID97_RS25980 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS10595 | | LysR family transcriptional regulator | strong | 35 | 67 |
| Rhodanobacter denitrificans MT42 | LRK55_RS10235 | | LysR family transcriptional regulator | insig. | 35 | 67 |
| Escherichia coli BL21 | ECD_00292 | | transcriptional activator of cyn operon; autorepressor | insig. | 29 | 97 |
| Escherichia coli BW25113 | b0338 | cynR | DNA-binding transcriptional dual regulator (NCBI) | insig. | 29 | 97 |
| Escherichia coli ECRC101 | OKFHMN_08840 | cynR | transcriptional regulator CynR | insig. | 29 | 97 |
| Escherichia coli ECRC101 | MCAODC_28070 | cynR | transcriptional regulator CynR | insig. | 29 | 97 |
| Escherichia coli ECRC102 | NIAGMN_06895 | cynR | transcriptional regulator CynR | insig. | 29 | 97 |
| Escherichia coli ECRC98 | JDDGAC_12495 | cynR | transcriptional regulator CynR | no data | 29 | 97 |
| Escherichia coli ECRC99 | KEDOAH_19125 | cynR | transcriptional regulator CynR | no data | 29 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS06980 | | LysR family transcriptional regulator | insig. | 37 | 59 |