Homologs of HMPREF1058_RS14495 from Phocaeicola vulgatus CL09T03C04

TIGR01212 family radical SAM protein
SEED: COG1242: Predicted Fe-S oxidoreductase

50 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14495 TIGR01212 family radical SAM protein sig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS10115 TIGR01212 family radical SAM protein insig. 98 100
o Bacteroides stercoris CC31F HMPREF1181_RS08775 TIGR01212 family radical SAM protein insig. 75 100
o Bacteroides ovatus ATCC 8483 BACOVA_04934 radical SAM protein, TIGR01212 family insig. 72 100
o Bacteroides thetaiotaomicron VPI-5482 BT4125 conserved hypothetical protein (NCBI ptt file) sig. 73 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16795 TIGR01212 family radical SAM protein insig. 70 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14980 TIGR01212 family radical SAM protein insig. 40 93
o Fusobacterium nucleatum SB010 HUW76_06060 TIGR01212 family radical SAM protein cofit 34 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_12015 TIGR01212 family radical SAM protein insig. 37 99
o Pectobacterium carotovorum WPP14 HER17_RS19905 TIGR01212 family radical SAM protein cofit 39 91
o Shewanella sp. ANA-3 Shewana3_3048 putative radical SAM protein (RefSeq) insig. 37 91
o Shewanella amazonensis SB2B Sama_0858 hypothetical protein (RefSeq) insig. 37 90
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04765 TIGR01212 family radical SAM protein insig. 38 92
o Dickeya dadantii 3937 DDA3937_RS01670 TIGR01212 family radical SAM protein insig. 38 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU0790 radical SAM protein, TIGR01212 family (TIGR) insig. 36 98
o Shewanella oneidensis MR-1 SO1326 conserved hypothetical protein (NCBI ptt file) insig. 38 91
o Dickeya dianthicola 67-19 HGI48_RS01565 TIGR01212 family radical SAM protein insig. 37 91
o Enterobacter sp. TBS_079 MPMX20_04125 hypothetical protein insig. 35 96
o Dickeya dianthicola ME23 DZA65_RS01640 TIGR01212 family radical SAM protein insig. 37 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2955 COG1242: Predicted Fe-S oxidoreductase insig. 36 91
  Desulfovibrio vulgaris Miyazaki F DvMF_2819 conserved hypothetical radical SAM protein (RefSeq) insig. 33 96
o Klebsiella michiganensis M5al BWI76_RS25305 TIGR01212 family radical SAM protein insig. 36 91
o Escherichia fergusonii Becca EFB2_00612 hypothetical protein insig. 35 91
o Escherichia coli Nissle 1917 ECOLIN_RS18470 TIGR01212 family radical SAM protein insig. 35 91
o Enterobacter asburiae PDN3 EX28DRAFT_3274 radical SAM protein, TIGR01212 family insig. 34 97
o Escherichia coli ECOR38 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein insig. 35 91
o Escherichia coli BL21 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein insig. 35 91
o Escherichia coli ECOR27 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein insig. 35 91
o Escherichia coli ECRC100 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein cofit 35 91
o Escherichia coli ECRC101 MCAODC_08410 yhcC TIGR01212 family radical SAM protein insig. 35 91
o Escherichia coli ECRC102 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein insig. 35 91
o Escherichia coli ECRC62 BNILDI_01845 yhcC TIGR01212 family radical SAM protein cofit 35 91
o Escherichia coli ECRC98 JDDGAC_21515 yhcC TIGR01212 family radical SAM protein cofit 35 91
o Escherichia coli ECRC99 KEDOAH_10260 yhcC TIGR01212 family radical SAM protein no data 35 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00489 hypothetical protein insig. 35 91
o Escherichia coli BW25113 b3211 yhcC predicted Fe-S oxidoreductase (NCBI) insig. 35 91
o Methanococcus maripaludis JJ MMJJ_RS06675 TIGR01212 family radical SAM protein strong 35 93
o Shewanella loihica PV-4 Shew_1033 putative radical SAM protein (RefSeq) insig. 36 93
o Methanococcus maripaludis S2 MMP_RS07685 TIGR01212 family radical SAM protein strong 34 93
o Serratia liquefaciens MT49 IAI46_22340 TIGR01212 family radical SAM protein insig. 35 91
  Fusobacterium nucleatum SB010 HUW76_02255 radical SAM protein cofit 25 71
  Methanococcus maripaludis JJ MMJJ_RS06255 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 strong 34 33
  Methanococcus maripaludis S2 MMP_RS08110 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 no data 36 33
  Bacteroides thetaiotaomicron VPI-5482 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) sig. 28 52
  Pseudomonas sp. S08-1 OH686_22200 Fe-S oxidoreductase cofit 28 49
  Bacteroides stercoris CC31F HMPREF1181_RS06440 radical SAM family heme chaperone HemW cofit 28 43
  Magnetospirillum magneticum AMB-1 AMB_RS00435 B12-binding domain-containing radical SAM protein cofit 30 28
  Marinobacter adhaerens HP15 HP15_1760 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase insig. 33 26
  Rhodospirillum rubrum S1H Rru_A3046 Radical SAM (NCBI) insig. 23 65
  Methanococcus maripaludis JJ MMJJ_RS05200 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 23 50