Homologs of GFF605 from Sphingobium sp. HT1-2

Putative ligase protein
KEGG: 2'-5' RNA ligase

47 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF605 Putative ligase protein cofit 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS16920 RNA 2',3'-cyclic phosphodiesterase insig. 31 95
o Ralstonia solanacearum GMI1000 RS_RS07265 RNA 2',3'-cyclic phosphodiesterase insig. 32 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00580 RNA 2',3'-cyclic phosphodiesterase insig. 30 95
o Ralstonia solanacearum UW163 UW163_RS13910 RNA 2',3'-cyclic phosphodiesterase insig. 30 95
o Caulobacter crescentus NA1000 CCNA_01713 2'-5' RNA ligase family protein insig. 30 90
o Caulobacter crescentus NA1000 Δfur CCNA_01713 2'-5' RNA ligase family protein cofit 30 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00235 2'-5' RNA ligase family protein insig. 31 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15695 hypothetical protein insig. 38 39
  Rhodanobacter denitrificans MT42 LRK55_RS15445 2'-5' RNA ligase insig. 38 39
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3617.1 FIG01209673: hypothetical protein insig. 29 75
  Agrobacterium fabrum C58 Atu0278 hypothetical protein insig. 27 90
o Lysobacter sp. OAE881 ABIE51_RS12220 RNA 2',3'-cyclic phosphodiesterase insig. 30 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS12095 RNA 2',3'-cyclic phosphodiesterase insig. 30 93
  Variovorax sp. SCN45 GFF203 hypothetical protein insig. 27 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15780 2'-5' RNA ligase family protein insig. 32 75
  Pseudomonas aeruginosa MRSN321 DY961_RS02685 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase insig. 30 95
  Pseudomonas sp. S08-1 OH686_01815 2'-5' RNA ligase insig. 30 91
  Pseudomonas stutzeri RCH2 Psest_3556 2'-5' RNA ligase insig. 29 90
  Enterobacter asburiae PDN3 EX28DRAFT_3736 2'-5' RNA ligase insig. 33 96
  Pseudomonas aeruginosa PA14 IKLFDK_14535 RNA 2' 3'-cyclic phosphodiesterase no data 30 95
  Dickeya dadantii 3937 DDA3937_RS15925 RNA 2',3'-cyclic phosphodiesterase insig. 30 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS32910 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase sig. 30 95
  Burkholderia phytofirmans PsJN BPHYT_RS11595 phosphoesterase no data 25 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13030 hypothetical protein insig. 37 27
  Pantoea sp. MT58 IAI47_15625 RNA 2',3'-cyclic phosphodiesterase insig. 29 95
  Variovorax sp. SCN45 GFF675 KEGG: 2'-5' RNA ligase insig. 29 71
  Dickeya dianthicola ME23 DZA65_RS17125 RNA 2',3'-cyclic phosphodiesterase insig. 29 90
  Rhodanobacter denitrificans MT42 LRK55_RS15535 2'-5' RNA ligase family protein insig. 35 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12970 RNA 2',3'-cyclic phosphodiesterase insig. 30 74
  Dickeya dianthicola 67-19 HGI48_RS16040 RNA 2',3'-cyclic phosphodiesterase insig. 29 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05150 2'-5' RNA ligase insig. 34 42
  Serratia liquefaciens MT49 IAI46_21200 RNA 2',3'-cyclic phosphodiesterase insig. 29 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2429 2'-5' RNA ligase superfamily insig. 29 66
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15070 thpR RNA 2' 3'-cyclic phosphodiesterase cofit 31 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13380 RNA 2',3'-cyclic phosphodiesterase insig. 29 95
  Escherichia coli ECOR38 HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase insig. 30 90
  Paraburkholderia graminis OAS925 ABIE53_002399 2'-5' RNA ligase insig. 40 29
  Azospirillum brasilense Sp245 AZOBR_RS02280 2'-5' RNA ligase no data 31 85
  Rhodanobacter sp. FW510-T8 OKGIIK_04420 thpR RNA 2',3'-cyclic phosphodiesterase insig. 27 95
  Escherichia coli BL21 ECD_00146 2'-5' RNA ligase insig. 30 90
  Escherichia fergusonii Becca EFB2_03897 RNA 2',3'-cyclic phosphodiesterase insig. 30 90
  Escherichia coli ECOR27 NOLOHH_02680 thpR RNA 2',3'-cyclic phosphodiesterase insig. 30 90
  Escherichia coli ECRC62 BNILDI_08990 thpR RNA 2',3'-cyclic phosphodiesterase insig. 30 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03515 'RNA 2',3'-cyclic phosphodiesterase' transl_table=11 insig. 30 90
  Escherichia coli BW25113 b0147 yadP orf, hypothetical protein (VIMSS) strong 30 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2475 2'-5' RNA ligase insig. 27 58