Homologs of GFF5276 from Sphingobium sp. HT1-2

RNA polymerase, sigma-24 subunit, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Sphingobium sp. HT1-2	GFF5276		RNA polymerase, sigma-24 subunit, ECF subfamily	cofit	100	100
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_0584		RNA polymerase sigma factor, sigma-70 family	insig.	64	100
	Sphingomonas koreensis DSMZ 15582	Ga0059261_0766		RNA polymerase sigma factor, sigma-70 family	insig.	36	78
o	Variovorax sp. SCN45	GFF2401		hypothetical protein	insig.	37	83
	Caulobacter crescentus NA1000	CCNA_01032		RNA polymerase ECF-type sigma factor	cofit	32	86
	Caulobacter crescentus NA1000 Δfur	CCNA_01032		RNA polymerase ECF-type sigma factor	cofit	32	86
	Sphingobium sp. HT1-2	GFF1845		hypothetical protein	cofit	36	78
	Sphingobium sp. HT1-2	GFF4047		RNA polymerase ECF-type sigma factor	cofit	32	79
	Pseudomonas sp. BP01	JOY50_RS26335		sigma-70 family RNA polymerase sigma factor	insig.	32	73
	Sphingobium sp. HT1-2	GFF4091		hypothetical protein	insig.	31	71
	Sphingomonas koreensis DSMZ 15582	Ga0059261_0778		RNA polymerase sigma factor, sigma-70 family	insig.	31	73
	Sphingobium sp. HT1-2	GFF5314		hypothetical protein	cofit	30	78
	Variovorax sp. SCN45	GFF791		RNA polymerase sigma factor RpoE	insig.	33	83
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3549		RNA polymerase sigma factor, sigma-70 family	insig.	32	77
	Pseudomonas aeruginosa MRSN321	DY961_RS18835		RNA polymerase sigma factor	sig.	31	68
	Pseudomonas aeruginosa PA14	IKLFDK_06170		RNA polymerase subunit sigma	no data	31	68
	Pseudomonas aeruginosa PUPa3	DQ20_RS52975		RNA polymerase sigma factor	insig.	31	68
	Alteromonas macleodii MIT1002	MIT1002_03920		putative RNA polymerase sigma factor FecI	cofit	28	70
	Pseudomonas stutzeri RCH2	Psest_4339		DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog	strong	33	72
	Alteromonas macleodii MIT1002	MIT1002_01237		Sigma-24	cofit	27	72
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2952		RNA polymerase sigma factor, sigma-70 family	strong	36	65
	Variovorax sp. SCN45	GFF4658		KEGG: RNA polymerase sigma-70 factor, ECF subfamily	insig.	35	74
	Dechlorosoma suillum PS	Dsui_2977		RNA polymerase sigma factor, sigma-70 family	insig.	33	72
	Pseudomonas orientalis W4I3	QF045_RS09635		RNA polymerase sigma factor	insig.	31	69
	Pseudomonas fluorescens SBW25	PFLU_RS26350		RNA polymerase sigma factor	insig.	27	79
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS26350		RNA polymerase sigma factor	sig.	27	79
	Pectobacterium carotovorum WPP14	HER17_RS17615		sigma-70 family RNA polymerase sigma factor	insig.	32	72
	Variovorax sp. SCN45	GFF2440		KEGG: RNA polymerase sigma-70 factor, ECF subfamily	insig.	34	74
	Pseudomonas aeruginosa MRSN321	DY961_RS15880		RNA polymerase sigma factor	sig.	31	74
	Pseudomonas aeruginosa PA14	IKLFDK_17505		RNA polymerase subunit sigma-70	insig.	31	74
	Pseudomonas aeruginosa PUPa3	DQ20_RS41200		RNA polymerase sigma factor	insig.	31	74
	Pseudomonas sp. BP01	JOY50_RS12755		sigma-70 family RNA polymerase sigma factor	insig.	31	81
	Variovorax sp. SCN45	GFF6854		RNA polymerase ECF-type sigma factor	insig.	31	67
	Pectobacterium carotovorum WPP14	HER17_RS14055		sigma-70 family RNA polymerase sigma factor	insig.	34	64
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2394		Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily	insig.	33	63
	Pseudomonas sp. SVBP6	COO64_RS02925		RNA polymerase sigma factor	insig.	29	81
	Pseudomonas sp. BP01	JOY50_RS02475		sigma-70 family RNA polymerase sigma factor	no data	34	80
	Herbaspirillum seropedicae SmR1	HSERO_RS11705		extracytoplasmic-function sigma-70 factor	insig.	34	79
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05735		RNA polymerase sigma-70 factor	insig.	29	73
	Pseudomonas sp. SVBP6	COO64_RS16360		RNA polymerase sigma factor	sig.	34	69
	Azospirillum brasilense Sp245	AZOBR_RS27315		RNA polymerase sigma 70	insig.	31	76
	Pseudomonas simiae WCS417	PS417_24420		RNA polymerase sigma70	no data	27	79
	Pseudomonas lactucae CFBP13502	GEMAOFIL_02135		putative RNA polymerase sigma factor FecI	cofit	31	72
	Pseudomonas aeruginosa MRSN321	DY961_RS28585		sigma-70 family RNA polymerase sigma factor	insig.	30	73
	Pseudomonas aeruginosa PA14	IKLFDK_09340		RNA polymerase subunit sigma	no data	30	73
	Pseudomonas aeruginosa PUPa3	DQ20_RS38070		sigma-70 family RNA polymerase sigma factor	no data	30	73
	Azospirillum brasilense Sp245	AZOBR_RS26615		RNA polymerase	insig.	30	77
	Klebsiella pneumoniae MKP103	KDGMDA_00205		RNA polymerase sigma factor FecI	insig.	28	72
	Sphingomonas koreensis DSMZ 15582	Ga0059261_0532		RNA polymerase sigma factor, sigma-70 family	insig.	33	73
	Pseudomonas fluorescens SBW25	PFLU_RS06940		sigma-70 family RNA polymerase sigma factor	insig.	31	69
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS06940		sigma-70 family RNA polymerase sigma factor	sig.	31	69
	Escherichia coli BL21	ECD_04159		RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor	insig.	29	72
	Escherichia coli Nissle 1917	ECOLIN_RS25750		RNA polymerase sigma factor FecI	insig.	29	72
	Escherichia coli BW25113	b4293	fecI	KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI)	strong	29	72
	Pseudomonas simiae WCS417	PS417_00670		RNA polymerase sigma factor	sig.	32	72
	Pseudomonas simiae WCS417	PS417_06880		RNA polymerase sigma factor	insig.	32	69
	Azospirillum sp. SherDot2	MPMX19_03088		putative RNA polymerase sigma factor FecI	insig.	31	76
	Pseudomonas simiae WCS417	PS417_09655		RNA polymerase sigma factor	insig.	31	72
	Pseudomonas sp. BP01	JOY50_RS02515		sigma-70 family RNA polymerase sigma factor	insig.	29	75
	Escherichia coli ECOR38	HEPCGN_09830	fecI	RNA polymerase sigma factor FecI	insig.	29	72
	Bacteroides ovatus ATCC 8483	BACOVA_03283		RNA polymerase sigma-70 factor	insig.	27	74
	Pseudomonas lactucae CFBP13502	GEMAOFIL_01536		hypothetical protein	cofit	32	69
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS09455		RNA polymerase sigma factor	insig.	32	81
	Methylophilus sp. DMC18	GFF1862		putative RNA polymerase sigma factor FecI	insig.	30	76
	Pseudomonas sp. SVBP6	COO64_RS11370		sigma-70 family RNA polymerase sigma factor	insig.	33	73
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS00640		sigma-70 family RNA polymerase sigma factor	cofit	32	72
	Acinetobacter baumannii LAC-4	RR41_RS08490		sigma-70 family RNA polymerase sigma factor	strong	27	73
	Variovorax sp. SCN45	GFF1525		RNA polymerase ECF-type sigma factor	insig.	33	63
	Pseudomonas orientalis W4I3	QF045_RS12270		sigma-70 family RNA polymerase sigma factor	insig.	31	76
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS05630		RNA polymerase sigma-70 factor	sig.	34	64
	Dechlorosoma suillum PS	Dsui_0621		RNA polymerase sigma factor, sigma-70 family	insig.	29	73
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS09420		RNA polymerase sigma factor	sig.	26	64
	Variovorax sp. SCN45	GFF4261		RNA polymerase ECF-type sigma factor	insig.	34	62
	Azospirillum sp. SherDot2	MPMX19_03082		ECF RNA polymerase sigma factor SigE	insig.	33	79
	Rhodospirillum rubrum S1H	Rru_A1438		Sigma-24 (FecI) (NCBI)	cofit	33	70
	Pseudomonas sp. RS175	PFR28_02867		putative RNA polymerase sigma factor FecI	insig.	33	63
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_21		Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis	sig.	33	63
	Sphingobium sp. HT1-2	GFF5162		RNA polymerase, sigma-24 subunit, ECF subfamily	insig.	30	74
	Pseudomonas sp. SVBP6	COO64_RS25100		sigma-70 family RNA polymerase sigma factor	insig.	29	70
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1926		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	27	64
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS02700		RNA polymerase sigma-70 factor	insig.	32	52
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.715.1		RNA polymerase sigma factor	insig.	29	73
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_6050		RNA polymerase sigma-70 factor, ECF subfamily	insig.	27	72
	Pseudomonas sp. DMC3	GFF759		putative RNA polymerase sigma factor FecI	insig.	31	63
	Pseudomonas sp. BP01	JOY50_RS22705		RNA polymerase sigma factor	insig.	29	76
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_133		Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis	insig.	31	63
	Pseudomonas sp. BP01	JOY50_RS19220		RNA polymerase sigma factor	insig.	29	83
	Pseudomonas sp. BP01	JOY50_RS18970		sigma-70 family RNA polymerase sigma factor	insig.	33	63
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2727		FIG006045: Sigma factor, ECF subfamily	insig.	29	73
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1181		FIG006045: Sigma factor, ECF subfamily	insig.	29	70
	Pseudomonas sp. SVBP6	COO64_RS14455		sigma-70 family RNA polymerase sigma factor	insig.	31	72
	Pseudomonas aeruginosa MRSN321	DY961_RS22365		RNA polymerase sigma factor	insig.	29	70
	Pseudomonas aeruginosa PA14	IKLFDK_23065		RNA polymerase sigma factor	sig.	29	70
	Pseudomonas aeruginosa PUPa3	DQ20_RS36960		RNA polymerase sigma factor	insig.	29	70
	Pseudomonas putida KT2440	PP_4244		alternative sigma factor	sig.	28	61
	Serratia liquefaciens MT49	IAI46_11745		sigma-70 family RNA polymerase sigma factor	no data	27	81
	Pseudomonas putida KT2440	PP_4611		RNA polymerase sigma-70 factor, ECF subfamily	sig.	30	72
	Pseudomonas orientalis W4I3	QF045_RS19140		sigma-70 family RNA polymerase sigma factor	insig.	32	63
	Pseudomonas lactucae CFBP13502	GEMAOFIL_04111		hypothetical protein	insig.	28	61
	Pseudomonas putida KT2440	PP_0865		ECF subfamily RNA polymerase sigma-24 factor	insig.	28	76