Homologs of PS417_22580 from Pseudomonas simiae WCS417

membrane protein
SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

39 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_22580 membrane protein sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS24215 RDD family protein insig. 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24215 RDD family protein insig. 94 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04670 hypothetical protein cofit 90 100
o Pseudomonas orientalis W4I3 QF045_RS24755 RDD family protein cofit 88 100
o Pseudomonas fluorescens FW300-N2E3 AO353_03725 hypothetical protein insig. 80 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_669 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) sig. 78 99
o Pseudomonas sp. RS175 PFR28_03442 hypothetical protein insig. 76 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1822 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) insig. 75 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5504 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) sig. 74 99
o Pseudomonas fluorescens FW300-N2C3 AO356_17880 hypothetical protein insig. 74 99
o Pseudomonas sp. DMC3 GFF5216 hypothetical protein insig. 72 99
o Pseudomonas syringae pv. syringae B728a Psyr_4021 RDD insig. 67 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4021 RDD insig. 67 99
o Pseudomonas stutzeri RCH2 Psest_3181 Predicted membrane protein/domain sig. 67 98
o Pseudomonas sp. S08-1 OH686_18275 Rhomboid family protein cofit 63 99
o Pseudomonas segetis P6 ACVTMO_RS18000 RDD family protein insig. 67 97
o Pseudomonas aeruginosa MRSN321 DY961_RS24905 RDD family protein strong 65 97
o Pseudomonas aeruginosa PA14 IKLFDK_02515 RDD family insig. 65 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS57355 RDD family protein sig. 65 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19460 RDD family protein insig. 45 98
o Rhodanobacter denitrificans MT42 LRK55_RS12215 RDD family protein insig. 45 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12475 RDD family protein insig. 45 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16020 RDD family protein insig. 46 97
o Variovorax sp. SCN45 GFF3764 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) insig. 42 97
o Lysobacter sp. OAE881 ABIE51_RS01785 RDD family protein insig. 45 97
o Variovorax sp. OAS795 ABID97_RS00215 RDD family protein insig. 42 86
  Synechocystis sp000284455 PCC 6803 SGL_RS02620 RDD family protein insig. 37 62
o Bacteroides thetaiotaomicron VPI-5482 BT2224 conserved hypothetical protein (NCBI ptt file) insig. 33 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3931 Predicted membrane protein/domain insig. 30 81
o Bacteroides ovatus ATCC 8483 BACOVA_03136 RDD family protein insig. 30 87
  Cellulophaga baltica 18 M666_RS11260 RDD family protein insig. 26 65
  Mycobacterium tuberculosis H37Rv Rv3695 Possible conserved membrane protein insig. 37 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22530 RDD family protein insig. 27 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18460 RDD family protein insig. 30 63
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08625 RDD family protein insig. 26 84
  Caulobacter crescentus NA1000 CCNA_00604 RDD family membrane protein insig. 29 67
  Caulobacter crescentus NA1000 Δfur CCNA_00604 RDD family membrane protein cofit 29 67
  Pseudomonas sp. SVBP6 COO64_RS08460 RDD family protein insig. 33 41