Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Klebsiella michiganensis M5al | BWI76_RS07230 | | transcriptional regulator | insig. | 100 | 100 |
o | Pantoea sp. MT58 | IAI47_01390 | | LacI family DNA-binding transcriptional regulator | insig. | 59 | 100 |
o | Rhizobium sp. OAE497 | ABIE40_RS22835 | | LacI family DNA-binding transcriptional regulator | insig. | 36 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS14935 | | LacI family DNA-binding transcriptional regulator | insig. | 36 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15995 | | LacI family DNA-binding transcriptional regulator | insig. | 34 | 92 |
o | Sinorhizobium meliloti 1021 | SMc02022 | | transcriptional regulator | insig. | 34 | 88 |
| Sinorhizobium meliloti 1021 | SMa2049 | | LacI family transcriptional regulator | insig. | 33 | 93 |
o | Bosea sp. OAE506 | ABIE41_RS01185 | | LacI family DNA-binding transcriptional regulator | insig. | 31 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16010 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 84 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS35755 | | LacI family transcription regulator | insig. | 33 | 85 |
o | Agrobacterium fabrum C58 | Atu5433 | | LacI family transcription regulator | insig. | 33 | 91 |
o | Paraburkholderia graminis OAS925 | ABIE53_005304 | | LacI family transcriptional regulator | insig. | 33 | 85 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03760 | | transcriptional regulator, LacI family | insig. | 33 | 85 |
o | Azospirillum sp. SherDot2 | MPMX19_02969 | | HTH-type transcriptional repressor PurR | insig. | 32 | 85 |
o | Azospirillum brasilense Sp245 | AZOBR_RS23065 | | LacI family transcription regulator | sig. | 32 | 85 |
| Rhizobium sp. OAE497 | ABIE40_RS16820 | | LacI family DNA-binding transcriptional regulator | strong | 32 | 88 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5722 | | FIG000557: hypothetical protein co-occurring with RecR | insig. | 31 | 87 |
o | Variovorax sp. SCN45 | GFF1454 | | Transcriptional regulator, LacI/PurR family | insig. | 33 | 86 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4390 | | Transcriptional regulator, LacI family | insig. | 31 | 87 |
| Variovorax sp. OAS795 | ABID97_RS11790 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 86 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_30145 | | LacI family transcriptional regulator | insig. | 31 | 94 |
| Sinorhizobium meliloti 1021 | SM_b20817 | | LacI family transcriptional regulator | insig. | 26 | 99 |
| Azospirillum sp. SherDot2 | MPMX19_03031 | | hypothetical protein | insig. | 30 | 89 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS11725 | | LacI family transcriptional regulator | insig. | 29 | 91 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11725 | | LacI family transcriptional regulator | insig. | 29 | 91 |
| Pseudomonas simiae WCS417 | PS417_11090 | | LacI family transcriptional regulator | insig. | 29 | 92 |
| Sinorhizobium meliloti 1021 | SMc03165 | | Novel Xylose regulator from LacI family (from data) | strong | 32 | 88 |
| Agrobacterium fabrum C58 | Atu4481 | | LacI family transcriptional regulator | strong | 30 | 88 |
| Azospirillum sp. SherDot2 | MPMX19_04035 | | hypothetical protein | insig. | 30 | 84 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS09400 | | LacI family DNA-binding transcriptional regulator | insig. | 31 | 91 |
o | Serratia liquefaciens MT49 | IAI46_11955 | | LacI family DNA-binding transcriptional regulator | insig. | 28 | 95 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1018 | | putative DNA-binding protein | insig. | 29 | 89 |
| Agrobacterium fabrum C58 | Atu4550 | | LacI family transcriptional regulator | insig. | 28 | 84 |
| Rhizobium sp. OAE497 | ABIE40_RS20420 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27985 | | LacI family transcriptional regulator | insig. | 31 | 85 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c13990 | | Novel Xylose regulator from LacI family (from data) | strong | 31 | 89 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05893 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | insig. | 30 | 85 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_27255 | | transcriptional regulator | insig. | 30 | 87 |
| Paraburkholderia graminis OAS925 | ABIE53_000966 | | LacI family transcriptional regulator | insig. | 31 | 85 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06408 | | transcriptional regulator, LacI family | insig. | 28 | 94 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_886 | | Transcriptional regulator, LacI family | insig. | 30 | 83 |
| Rhizobium sp. OAE497 | ABIE40_RS17110 | | LacI family DNA-binding transcriptional regulator | insig. | 29 | 88 |
| Ralstonia solanacearum PSI07 | RPSI07_RS00770 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 89 |
| Serratia liquefaciens MT49 | IAI46_10485 | | LacI family DNA-binding transcriptional regulator | insig. | 27 | 81 |
| Klebsiella michiganensis M5al | BWI76_RS14055 | | LacI family transcriptional regulator | insig. | 26 | 99 |
| Sinorhizobium meliloti 1021 | SMc00163 | | transcriptional regulator | insig. | 27 | 79 |
| Ralstonia solanacearum PSI07 | RPSI07_RS17920 | | LacI family DNA-binding transcriptional regulator | insig. | 28 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS28560 | | LacI family DNA-binding transcriptional regulator | insig. | 23 | 89 |
| Pantoea sp. MT58 | IAI47_19025 | | LacI family DNA-binding transcriptional regulator | insig. | 25 | 79 |
| Pantoea sp. MT58 | IAI47_17490 | | LacI family DNA-binding transcriptional regulator | insig. | 27 | 77 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_23190 | | LacI family transcriptional regulator | insig. | 30 | 76 |
| Phaeobacter inhibens DSM 17395 | PGA1_c07190 | | transcriptional regulator, IclR family | insig. | 26 | 86 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS15435 | | hypothetical protein | insig. | 26 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS12895 | | hypothetical protein | insig. | 26 | 99 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08680 | | substrate-binding domain-containing protein | insig. | 23 | 92 |
| Azospirillum sp. SherDot2 | MPMX19_03760 | | Ribose import binding protein RbsB | insig. | 28 | 60 |
| Pectobacterium carotovorum WPP14 | HER17_RS03725 | | LacI family DNA-binding transcriptional regulator | insig. | 28 | 62 |
| Dinoroseobacter shibae DFL-12 | Dshi_1273 | | transcriptional regulator, LacI family (RefSeq) | insig. | 28 | 62 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02713 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | insig. | 25 | 45 |
| Serratia liquefaciens MT49 | IAI46_01445 | | TMAO reductase system periplasmic protein TorT | insig. | 26 | 51 |
| Rhizobium sp. OAE497 | ABIE40_RS24670 | | D-ribose ABC transporter substrate-binding protein | insig. | 23 | 77 |
| Escherichia coli BL21 | ECD_03637 | | D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor | insig. | 27 | 44 |
| Escherichia fergusonii Becca | EFB2_04882 | | Ribose import binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli ECOR27 | NOLOHH_06870 | rbsB | ribose ABC transporter substrate-binding protein RbsB | cofit | 27 | 44 |
| Escherichia coli ECRC101 | OKFHMN_14735 | rbsB | ribose ABC transporter substrate-binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli ECRC101 | MCAODC_05240 | rbsB | ribose ABC transporter substrate-binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli ECRC102 | NIAGMN_12490 | rbsB | ribose ABC transporter substrate-binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli ECRC62 | BNILDI_04655 | rbsB | ribose ABC transporter substrate-binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli ECRC98 | JDDGAC_18355 | rbsB | ribose ABC transporter substrate-binding protein RbsB | no data | 27 | 44 |
| Escherichia coli ECRC99 | KEDOAH_13415 | rbsB | ribose ABC transporter substrate-binding protein RbsB | no data | 27 | 44 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04302 | | Ribose import binding protein RbsB | insig. | 27 | 44 |
| Escherichia coli BW25113 | b3751 | rbsB | D-ribose transporter subunit (NCBI) | strong | 27 | 44 |
| Escherichia coli ECOR38 | HEPCGN_13445 | rbsB | ribose ABC transporter substrate-binding protein RbsB | cofit | 27 | 44 |
| Dickeya dadantii 3937 | DDA3937_RS15325 | | LacI family DNA-binding transcriptional regulator | sig. | 25 | 70 |
| Escherichia fergusonii Becca | EFB2_00571 | | Ribose import binding protein RbsB | insig. | 23 | 59 |
| Escherichia coli Nissle 1917 | ECOLIN_RS18690 | | substrate-binding domain-containing protein | insig. | 23 | 59 |
| Dickeya dianthicola ME23 | DZA65_RS16225 | | LacI family transcriptional regulator | sig. | 25 | 83 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21565 | | ribose ABC transporter substrate-binding protein RbsB | insig. | 26 | 44 |
| Dickeya dianthicola ME23 | DZA65_RS18545 | | LacI family transcriptional regulator | sig. | 26 | 61 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4027 | | ABC-type sugar transport system, periplasmic component | cofit | 26 | 44 |
| Dickeya dadantii 3937 | DDA3937_RS17420 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 63 |
| Klebsiella michiganensis M5al | BWI76_RS14590 | | putative ABC transport system nucleotide binding/ATPase component | insig. | 25 | 36 |
| Phaeobacter inhibens DSM 17395 | PGA1_c23100 | | putative D-ribose-binding periplasmic protein | insig. | 22 | 60 |
| Dickeya dianthicola 67-19 | HGI48_RS15405 | | LacI family DNA-binding transcriptional regulator | insig. | 25 | 63 |
| Escherichia coli ECOR38 | HEPCGN_16540 | | sugar ABC transporter | cofit | 22 | 59 |
| Enterobacter sp. TBS_079 | MPMX20_04616 | | Ribose import binding protein RbsB | strong | 26 | 44 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1706 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | insig. | 26 | 44 |
| Shewanella oneidensis MR-1 | SO3714 | | sugar-binding protein, putative (NCBI ptt file) | strong | 26 | 28 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00860 | | transcriptional regulator, LacI family | insig. | 24 | 75 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2150 | | Transcriptional regulator AglR, LacI family | insig. | 27 | 57 |
| Shewanella sp. ANA-3 | Shewana3_0877 | | sugar-binding protein, putative (RefSeq) | insig. | 26 | 28 |
| Escherichia fergusonii Becca | EFB2_03085 | | Periplasmic protein TorT | insig. | 28 | 32 |
| Escherichia coli ECRC101 | OKFHMN_04715 | torT | TMAO reductase system periplasmic protein TorT | no data | 28 | 32 |
| Escherichia coli ECRC101 | MCAODC_24100 | torT | TMAO reductase system periplasmic protein TorT | insig. | 28 | 32 |
| Escherichia coli ECRC102 | NIAGMN_23135 | torT | TMAO reductase system periplasmic protein TorT | insig. | 28 | 32 |
| Escherichia coli ECRC98 | JDDGAC_08325 | torT | TMAO reductase system periplasmic protein TorT | no data | 28 | 32 |
| Escherichia coli ECRC99 | KEDOAH_23030 | torT | TMAO reductase system periplasmic protein TorT | no data | 28 | 32 |
| Pantoea sp. MT58 | IAI47_00365 | | ribose ABC transporter substrate-binding protein RbsB | insig. | 27 | 43 |
| Klebsiella michiganensis M5al | BWI76_RS00285 | | D-ribose ABC transporter substrate-binding protein | strong | 25 | 44 |
| Escherichia coli BL21 | ECD_00997 | | periplasmic sensory protein associated with the TorRS two-component regulatory system | insig. | 24 | 53 |