Homologs of Dshi_1708 from Dinoroseobacter shibae DFL-12

NERD domain protein (RefSeq)

32 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_1708 NERD domain protein (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_0313 DNA topoisomerase I (RefSeq) insig. 37 91
  Shewanella sp. ANA-3 Shewana3_2211 NERD domain-containing protein (RefSeq) insig. 44 54
  Kangiella aquimarina DSM 16071 B158DRAFT_1224 Nuclease-related domain. insig. 36 66
  Acinetobacter radioresistens SK82 MPMX26_02565 hypothetical protein insig. 36 71
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05145 NERD domain-containing protein insig. 30 92
  Shewanella amazonensis SB2B Sama_1610 hypothetical protein (RefSeq) insig. 32 71
  Rhodanobacter sp. FW510-T8 OKGIIK_04145 Restriction endonuclease insig. 54 19
  Ralstonia solanacearum GMI1000 RS_RS17120 hypothetical protein insig. 54 20
  Pseudomonas stutzeri RCH2 Psest_2737 Restriction endonuclease insig. 53 15
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2015 Putative chaperonin insig. 45 24
  Ralstonia solanacearum PSI07 RPSI07_RS07995 endonuclease insig. 52 20
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09280 endonuclease insig. 58 14
  Ralstonia solanacearum UW163 UW163_RS04310 endonuclease insig. 58 14
  Pseudomonas fluorescens SBW25 PFLU_RS09715 DNA topoisomerase III insig. 40 31
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09715 DNA topoisomerase III insig. 40 31
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5338.1 FIG01210434: hypothetical protein insig. 48 18
  Marinobacter adhaerens HP15 HP15_1186 DNA topoisomerase III insig. 42 19
  Methanococcus maripaludis S2 MMP_RS06465 NERD domain-containing protein insig. 30 30
  Methanococcus maripaludis JJ MMJJ_RS07885 NERD domain-containing protein insig. 18 74
  Phaeobacter inhibens DSM 17395 PGA1_c06220 DNA topoisomerase TopA no data 45 18
  Magnetospirillum magneticum AMB-1 AMB_RS03505 type I DNA topoisomerase no data 43 18
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2568.1 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 51 14
  Pseudomonas fluorescens FW300-N2C3 AO356_00120 DNA topoisomerase III insig. 51 14
  Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 51 14
  Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 50 15
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1978 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 50 14
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 41 18
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 41 18
  Paraburkholderia sabiae LMG 24235 QEN71_RS44025 nuclease-related domain-containing protein insig. 41 22
  Dinoroseobacter shibae DFL-12 Dshi_1137 DNA topoisomerase I (RefSeq) no data 51 15
  Variovorax sp. SCN45 GFF6673 Membrane protein insig. 42 12