Homologs of BT1656 from Bacteroides thetaiotaomicron VPI-5482

putative transcriptional regulator (NCBI ptt file)
SEED: Transcription antitermination protein UpdY

74 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT1656 putative transcriptional regulator (NCBI ptt file) sig. 100 100
  Bacteroides thetaiotaomicron VPI-5482 BT1725 putative transcriptional regulator (NCBI ptt file) no data 98 100
  Bacteroides thetaiotaomicron VPI-5482 BT0596 putative transcriptional regulator (NCBI ptt file) insig. 89 98
o Bacteroides ovatus ATCC 8483 BACOVA_05504 transcription termination/antitermination factor NusG insig. 91 97
  Bacteroides ovatus ATCC 8483 BACOVA_01723 transcription termination/antitermination factor NusG insig. 88 98
  Bacteroides ovatus ATCC 8483 BACOVA_02457 transcription termination/antitermination factor NusG cofit 89 98
  Bacteroides ovatus ATCC 8483 BACOVA_03746 transcription termination/antitermination factor NusG insig. 88 98
  Bacteroides ovatus ATCC 8483 BACOVA_00196 transcription termination/antitermination factor NusG sig. 85 97
  Bacteroides thetaiotaomicron VPI-5482 BT0376 putative transcriptional regulator (NCBI ptt file) insig. 80 98
  Bacteroides ovatus ATCC 8483 BACOVA_03690 transcription termination/antitermination factor NusG strong 68 98
  Bacteroides ovatus ATCC 8483 BACOVA_00023 transcription termination/antitermination factor NusG no data 88 80
  Bacteroides thetaiotaomicron VPI-5482 BT1358 putative transcriptional regulator (NCBI ptt file) strong 67 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17370 UpxY family transcription antiterminator sig. 62 84
  Phocaeicola dorei CL03T12C01 ABI39_RS13390 UpxY family transcription antiterminator insig. 62 84
  Bacteroides stercoris CC31F HMPREF1181_RS03935 UpxY family transcription antiterminator cofit 62 84
  Bacteroides thetaiotaomicron VPI-5482 BT2886 putative transcriptional regulator (NCBI ptt file) sig. 57 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 33 88
  Phocaeicola dorei CL03T12C01 ABI39_RS11965 UpxY family transcription antiterminator insig. 35 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16105 UpxY family transcription antiterminator insig. 35 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14250 UpxY family transcription antiterminator insig. 30 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 28 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4415 Transcription antiterminator strong 25 83
  Cellulophaga baltica 18 M666_RS03405 UpxY family transcription antiterminator cofit 35 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08980 UpxY family transcription antiterminator strong 27 72
  Bacteroides stercoris CC31F HMPREF1181_RS16775 UpxY family transcription antiterminator cofit 28 84
  Bacteroides stercoris CC31F HMPREF1181_RS04415 UpxY family transcription antiterminator strong 29 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13090 UpxY family transcription antiterminator insig. 27 81
  Bacteroides thetaiotaomicron VPI-5482 BT0462 putative transcriptional regulator (NCBI ptt file) insig. 27 85
  Phocaeicola dorei CL03T12C01 ABI39_RS17595 UpxY family transcription antiterminator insig. 27 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03580 UpxY family transcription antiterminator strong 26 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00925 UpxY family transcription antiterminator strong 25 83
  Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 25 79
  Pseudomonas sp. DMC3 GFF3566 Transcription antitermination protein RfaH no data 23 83
  Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 24 78
  Rhizobium sp. OAE497 ABIE40_RS07770 transcription termination/antitermination protein NusG no data 26 85
  Sinorhizobium meliloti 1021 SMc01322 transcription antitermination protein NusG no data 25 86
  Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 24 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02604 Transcription antitermination protein RfaH cofit 24 78
  Klebsiella pneumoniae MKP103 KDGMDA_09835 transcription/translation regulatory transformer protein RfaH strong 23 78
  Klebsiella pneumoniae MRSN742743 GJGHJB_04799 rfaH transcription/translation regulatory transformer protein RfaH strong 23 78
  Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 25 78
  Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 23 78
  Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 23 78
  Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 23 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 22 78
  Bacteroides stercoris CC31F HMPREF1181_RS14980 UpxY family transcription antiterminator cofit 27 71
  Phocaeicola dorei CL03T12C01 ABI39_RS11160 UpxY family transcription antiterminator insig. 26 85
  Agrobacterium fabrum C58 Atu0450 transcription antitermination protein strong 25 70
  Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 22 78
  Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC100 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH cofit 22 78
  Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 22 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH strong 22 78
  Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 22 78
  Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 25 77
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 22 78
  Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 24 82
  Agrobacterium fabrum C58 Atu1961 transcription antitermination protein NusG no data 25 85
  Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 22 78
  Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 23 78
  Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 23 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19285 transcription termination/antitermination factor NusG no data 23 78
  Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 22 78
  Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 21 77
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08615 rfaH transcription/translation regulatory transformer protein RfaH cofit 21 77
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS18500 rfaH transcription/translation regulatory transformer protein RfaH no data 21 77
  Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 21 77
  Xanthobacter sp. DMC5 GFF3 Transcription termination/antitermination protein NusG no data 25 86
  Rhodopseudomonas palustris CGA009 TX73_016925 transcription termination/antitermination protein NusG no data 24 86