Homologs of BT1656 from Bacteroides thetaiotaomicron VPI-5482

putative transcriptional regulator (NCBI ptt file)
SEED: Transcription antitermination protein UpdY

70 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT1656 putative transcriptional regulator (NCBI ptt file) sig. 100 100
  Bacteroides thetaiotaomicron VPI-5482 BT1725 putative transcriptional regulator (NCBI ptt file) no data 98 100
  Bacteroides thetaiotaomicron VPI-5482 BT0596 putative transcriptional regulator (NCBI ptt file) insig. 89 98
o Bacteroides ovatus ATCC 8483 BACOVA_05504 transcription termination/antitermination factor NusG insig. 91 97
  Bacteroides ovatus ATCC 8483 BACOVA_01723 transcription termination/antitermination factor NusG insig. 88 98
  Bacteroides ovatus ATCC 8483 BACOVA_02457 transcription termination/antitermination factor NusG insig. 89 98
  Bacteroides ovatus ATCC 8483 BACOVA_03746 transcription termination/antitermination factor NusG insig. 88 98
  Bacteroides ovatus ATCC 8483 BACOVA_00196 transcription termination/antitermination factor NusG sig. 85 97
  Bacteroides thetaiotaomicron VPI-5482 BT0376 putative transcriptional regulator (NCBI ptt file) insig. 80 98
  Bacteroides ovatus ATCC 8483 BACOVA_03690 transcription termination/antitermination factor NusG strong 68 98
  Bacteroides ovatus ATCC 8483 BACOVA_00023 transcription termination/antitermination factor NusG no data 88 80
  Bacteroides thetaiotaomicron VPI-5482 BT1358 putative transcriptional regulator (NCBI ptt file) strong 67 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17370 UpxY family transcription antiterminator sig. 62 84
  Phocaeicola dorei CL03T12C01 ABI39_RS13390 UpxY family transcription antiterminator insig. 62 84
  Bacteroides stercoris CC31F HMPREF1181_RS03935 UpxY family transcription antiterminator cofit 62 84
  Bacteroides thetaiotaomicron VPI-5482 BT2886 putative transcriptional regulator (NCBI ptt file) sig. 57 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 33 88
  Phocaeicola dorei CL03T12C01 ABI39_RS11965 UpxY family transcription antiterminator insig. 35 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16105 UpxY family transcription antiterminator insig. 35 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14250 UpxY family transcription antiterminator insig. 30 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 28 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4415 Transcription antiterminator strong 25 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08980 UpxY family transcription antiterminator insig. 27 72
  Bacteroides stercoris CC31F HMPREF1181_RS16775 UpxY family transcription antiterminator cofit 28 84
  Bacteroides stercoris CC31F HMPREF1181_RS04415 UpxY family transcription antiterminator strong 29 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13090 UpxY family transcription antiterminator insig. 27 81
  Bacteroides thetaiotaomicron VPI-5482 BT0462 putative transcriptional regulator (NCBI ptt file) insig. 27 85
  Phocaeicola dorei CL03T12C01 ABI39_RS17595 UpxY family transcription antiterminator insig. 27 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03580 UpxY family transcription antiterminator sig. 26 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00925 UpxY family transcription antiterminator strong 25 83
  Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 25 79
  Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 24 78
  Rhizobium sp. OAE497 ABIE40_RS07770 transcription termination/antitermination protein NusG no data 26 85
  Sinorhizobium meliloti 1021 SMc01322 transcription antitermination protein NusG no data 25 86
  Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 24 78
  Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 25 78
  Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 23 78
  Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 23 78
  Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 23 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 22 78
  Phocaeicola dorei CL03T12C01 ABI39_RS11160 UpxY family transcription antiterminator insig. 26 85
  Bacteroides stercoris CC31F HMPREF1181_RS14980 UpxY family transcription antiterminator cofit 27 71
  Agrobacterium fabrum C58 Atu0450 transcription antitermination protein strong 25 70
  Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 22 78
  Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC101 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH insig. 22 78
  Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH sig. 22 78
  Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 22 78
  Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH no data 22 78
  Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 22 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH cofit 22 78
  Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 22 78
  Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 25 77
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 22 78
  Agrobacterium fabrum C58 Atu1961 transcription antitermination protein NusG no data 25 85
  Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 24 82
  Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 22 78
  Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 23 78
  Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 23 77
  Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 22 78
  Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 21 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19285 transcription termination/antitermination factor NusG no data 23 78
  Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 21 77
  Rhodopseudomonas palustris CGA009 TX73_016925 transcription termination/antitermination protein NusG no data 24 86
  Castellaniella sp019104865 MT123 ABCV34_RS11675 transcription termination/antitermination protein NusG no data 27 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02880 transcription termination/antitermination factor NusG no data 25 78
  Dickeya dianthicola 67-19 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH strong 22 78
  Dickeya dianthicola ME23 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH cofit 22 78