Conservation of cofitness between Xcc-8004.237.1 and Xcc-8004.5310.1 in Xanthomonas campestris pv. campestris strain 8004

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.237.1 FIG01211085: hypothetical protein 1.0 Xcc-8004.5310.1 dicarboxylate transport protein 0.34 13
Lysobacter sp. OAE881 0.63 ABIE51_RS01490 alpha/beta fold hydrolase 0.37 ABIE51_RS02120 MFS transporter low > 62
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS15340 alpha/beta fold hydrolase 0.36 ABZR86_RS08525 MFS transporter low > 74
Pseudomonas sp. RS175 0.11 PFR28_04263 hypothetical protein 0.38 PFR28_03468 Alpha-ketoglutarate permease low > 88
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS03315 alpha/beta hydrolase 0.31 HSERO_RS16820 2-oxoglutarate:H+ symporter (from data) low > 78
Pantoea sp. MT58 0.11 IAI47_01985 hydrolase 0.34 IAI47_04465 MFS transporter low > 76
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_4755 hydrolase, alpha/beta fold family 0.37 Psyr_3999 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_4755 hydrolase, alpha/beta fold family 0.37 Psyr_3999 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens FW300-N1B4 0.11 Pf1N1B4_2319 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.36 Pf1N1B4_686 Dicarboxylate MFS transporter low > 87
Pseudomonas simiae WCS417 0.11 PS417_26830 alpha/beta hydrolase 0.37 PS417_22650 MFS transporter low > 88
Pseudomonas fluorescens SBW25 0.11 PFLU_RS28475 hydrolase 0.37 PFLU_RS24285 MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.11 PFLU_RS28475 hydrolase 0.37 PFLU_RS24285 MFS transporter low > 109
Variovorax sp. SCN45 0.10 GFF3721 Hydrolase, alpha/beta fold family 0.34 GFF5985 dicarboxylic acid transporter PcaT low > 127
Dickeya dadantii 3937 0.10 DDA3937_RS19425 hydrolase 0.32 DDA3937_RS16800 MFS transporter low > 74
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_4578 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.38 Pf6N2E2_5486 Alpha-ketoglutarate permease (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_13315 alpha/beta hydrolase 0.38 AO356_17790 alpha-ketoglutarate permease (MHS family) (from data) low > 104
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS02390 hydrolase 0.32 QEN71_RS38030 MFS transporter low > 153
Enterobacter asburiae PDN3 0.10 EX28DRAFT_4176 Predicted hydrolase of the alpha/beta-hydrolase fold 0.32 EX28DRAFT_0060 metabolite-proton symporter low > 76
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_989 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.37 PfGW456L13_1805 Dicarboxylate MFS transporter low > 87
Enterobacter sp. TBS_079 0.09 MPMX20_04256 hypothetical protein 0.31 MPMX20_03456 Alpha-ketoglutarate permease low > 85
Pseudomonas putida KT2440 0.09 PP_5117 putative hydrolase 0.36 PP_1400 Alpha-ketoglutarate permease low > 96
Cupriavidus basilensis FW507-4G11 0.09 RR42_RS03155 alpha/beta hydrolase 0.35 RR42_RS21430 alpha-ketoglutarate permease low > 128
Pseudomonas fluorescens FW300-N2E3 0.09 AO353_08270 alpha/beta hydrolase 0.37 AO353_03810 Alpha-ketoglutarate permease, MFS superfamily (from data) low > 101
Rahnella sp. WP5 0.09 EX31_RS04515 hydrolase 0.32 EX31_RS13690 MFS transporter low > 89
Paraburkholderia graminis OAS925 0.09 ABIE53_003436 putative alpha/beta-fold hydrolase 0.32 ABIE53_002314 MHS family alpha-ketoglutarate permease-like MFS transporter low > 113
Variovorax sp. OAS795 0.08 ABID97_RS00345 alpha/beta fold hydrolase 0.33 ABID97_RS08005 MFS family transporter low > 91
Escherichia coli ECOR27 0.08 NOLOHH_09060 yheT hydrolase 0.32 NOLOHH_12970 kgtP alpha-ketoglutarate permease low > 75
Escherichia coli ECRC62 0.08 BNILDI_02460 yheT hydrolase 0.32 BNILDI_11775 kgtP alpha-ketoglutarate permease low > 75
Klebsiella michiganensis M5al 0.08 BWI76_RS25965 hydrolase 0.30 BWI76_RS21415 MFS transporter low > 92
Escherichia coli ECRC101 0.08 MCAODC_07790 yheT hydrolase 0.31 MCAODC_11830 kgtP alpha-ketoglutarate permease low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.08 GFF3716 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.34 GFF2093 Alpha-ketoglutarate permease low > 78
Escherichia coli ECRC99 0.08 KEDOAH_10880 yheT hydrolase 0.31 KEDOAH_06920 kgtP alpha-ketoglutarate permease — —
Escherichia coli ECRC100 0.08 OKFHMN_17260 yheT hydrolase 0.31 OKFHMN_21300 kgtP alpha-ketoglutarate permease low > 80
Escherichia coli ECRC102 0.08 NIAGMN_15030 yheT hydrolase 0.31 NIAGMN_19070 kgtP alpha-ketoglutarate permease — —
Escherichia coli ECRC98 0.08 JDDGAC_20890 yheT hydrolase 0.31 JDDGAC_24965 kgtP alpha-ketoglutarate permease low > 86
Burkholderia phytofirmans PsJN 0.08 BPHYT_RS16305 alpha/beta hydrolase 0.34 BPHYT_RS27905 MFS transporter low > 109
Escherichia coli ECOR38 0.08 HEPCGN_16085 yheT hydrolase 0.32 HEPCGN_20425 kgtP alpha-ketoglutarate permease low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.08 OHPLBJKB_00349 hypothetical protein 0.32 OHPLBJKB_01119 Alpha-ketoglutarate permease low > 73
Escherichia coli BL21 0.08 ECD_03204 UPF0017 family putative hydrolase 0.32 ECD_02481 alpha-ketoglutarate transporter low > 61
Escherichia coli BW25113 0.08 b3353 yheT predicted hydrolase (NCBI) 0.32 b2587 kgtP alpha-ketoglutarate transporter (NCBI) low > 76
Escherichia fergusonii Becca 0.08 EFB2_00469 hypothetical protein 0.31 EFB2_01309 Alpha-ketoglutarate permease low > 86
Escherichia coli Nissle 1917 0.08 ECOLIN_RS19205 hydrolase 0.31 ECOLIN_RS14640 alpha-ketoglutarate permease low > 55

Not shown: 19 genomes with orthologs for Xcc-8004.237.1 only; 22 genomes with orthologs for Xcc-8004.5310.1 only