Conservation of cofitness between Xcc-8004.4611.1 and Xcc-8004.459.1 in Xanthomonas campestris pv. campestris strain 8004

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 1.0 Xcc-8004.459.1 4-hydroxybenzoate transporter 0.49 4
Magnetospirillum magneticum AMB-1 0.59 AMB_RS12445 rRNA pseudouridine synthase 0.20 AMB_RS01320 MFS transporter low > 64
Caulobacter crescentus NA1000 0.47 CCNA_01915 ribosomal small subunit pseudouridine synthase A 0.12 CCNA_02495 4-hydroxybenzoate transporter low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_01915 ribosomal small subunit pseudouridine synthase A 0.12 CCNA_02495 4-hydroxybenzoate transporter low > 67
Ralstonia solanacearum PSI07 0.32 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase 0.21 RPSI07_RS09665 MFS transporter low > 81
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08605 pseudouridine synthase 0.22 ABZR87_RS20845 MFS transporter low > 80
Dickeya dadantii 3937 0.31 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.16 DDA3937_RS12080 aromatic acid/H+ symport family MFS transporter low > 74
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase 0.22 RALBFv3_RS14650 MFS transporter low > 76
Ralstonia solanacearum UW163 0.31 UW163_RS00960 16S rRNA pseudouridine(516) synthase 0.22 UW163_RS12120 MFS transporter — —
Ralstonia solanacearum GMI1000 0.31 RS_RS03390 16S rRNA pseudouridine(516) synthase 0.21 RS_RS05430 MFS transporter low > 80
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS15880 pseudouridine synthase 0.52 RR42_RS32565 MFS transporter low > 128
Erwinia amylovora T8 0.29 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA 0.20 OLJFJH_13950 aromatic acid/H+ symport family MFS transporter low > 58
Variovorax sp. SCN45 0.29 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.18 GFF2258 4-hydroxybenzoate transporter low > 127
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS03150 16S rRNA pseudouridine(516) synthase 0.23 QEN71_RS26165 MFS transporter low > 153
Serratia liquefaciens MT49 0.29 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.19 IAI46_12880 MFS transporter low > 86
Paraburkholderia graminis OAS925 0.28 ABIE53_003276 16S rRNA pseudouridine516 synthase 0.22 ABIE53_004022 AAHS family 4-hydroxybenzoate transporter-like MFS transporter low > 113
Variovorax sp. OAS795 0.28 ABID97_RS09900 16S rRNA pseudouridine(516) synthase 0.20 ABID97_RS29165 MFS transporter low > 91
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) 0.22 H281DRAFT_04740 MFS transporter, AAHS family, 4-hydroxybenzoate transporter low > 103
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS15560 pseudouridine synthase 0.20 BPHYT_RS30250 4-hydroxybenzoate transporter low > 109
Acinetobacter radioresistens SK82 0.26 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A 0.20 MPMX26_00124 Gentisate transporter low > 36
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS08590 pseudouridine synthase 0.23 HSERO_RS05600 4-hydroxybenzoate transporter low > 78
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.22 Pf1N1B4_4198 4-hydroxybenzoate transporter low > 87
Acinetobacter baumannii LAC-4 0.26 RR41_RS07045 rRNA pseudouridine synthase 0.40 RR41_RS09880 MFS transporter low > 55
Pseudomonas simiae WCS417 0.25 PS417_07010 pseudouridine synthase 0.22 PS417_10345 MFS transporter low > 88
Pseudomonas stutzeri RCH2 0.25 Psest_3049 pseudouridine synthase 0.19 Psest_2695 Sugar phosphate permease low > 67
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.19 PfGW456L13_4593 4-hydroxybenzoate transporter low > 87
Pseudomonas sp. DMC3 0.24 GFF2251 Ribosomal small subunit pseudouridine synthase A 0.19 GFF2200 4-hydroxybenzoate transporter PcaK low > 89
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_04690 16S rRNA pseudouridine(516) synthase 0.18 AO356_04945 4-hydroxybenzoate transporter low > 104
Pseudomonas aeruginosa PA14 0.24 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A 0.39 IKLFDK_29035 MFS transporter low > 100
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS07085 pseudouridine synthase 0.19 PFLU_RS06720 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS07085 pseudouridine synthase 0.19 PFLU_RS06720 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.18 Pf6N2E2_2838 4-hydroxybenzoate transporter low > 103
Pseudomonas segetis P6 0.24 MPMX49_01369 Ribosomal small subunit pseudouridine synthase A 0.21 MPMX49_02728 4-hydroxybenzoate transporter PcaK low > 75
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_17535 16S rRNA pseudouridine(516) synthase 0.19 AO353_14270 MFS transporter low > 101
Pseudomonas sp. RS175 0.23 PFR28_00665 Ribosomal small subunit pseudouridine synthase A 0.18 PFR28_00619 4-hydroxybenzoate transporter PcaK low > 88
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_01553 Ribosomal small subunit pseudouridine synthase A 0.19 GEMAOFIL_01499 4-hydroxybenzoate transporter PcaK low > 93
Pseudomonas sp. SVBP6 0.23 COO64_RS16420 pseudouridine synthase 0.19 COO64_RS03650 aromatic acid/H+ symport family MFS transporter low > 93
Pseudomonas putida KT2440 0.22 PP_1409 ribosomal small subunit pseudouridine synthase A 0.43 PP_3740 Major facilitator family transporter low > 96
Pseudomonas sp. BP01 0.22 JOY50_RS14575 pseudouridine synthase 0.43 JOY50_RS05085 MFS transporter low > 84

Not shown: 16 genomes with orthologs for Xcc-8004.4611.1 only; 30 genomes with orthologs for Xcc-8004.459.1 only