| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_013300 | | efflux transporter outer membrane subunit | 1.0 | TX73_024225 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 0.57 | 4 |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS17255 | | transporter | 0.35 | HSERO_RS00975 | | alpha,alpha-trehalose-phosphate synthase | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.27 | GFF3903 | | RND efflux system, outer membrane lipoprotein CmeC | 0.35 | GFF1624 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 90 |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A3237 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.39 | Rru_A2485 | | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) (NCBI) | low | > 58 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS09200 | | efflux transporter outer membrane subunit | 0.39 | QEN71_RS24775 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.24 | BPHYT_RS10540 | | secretion protein | 0.39 | BPHYT_RS05590 | | trehalose-6-phosphate synthase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_005789 | | multidrug efflux system outer membrane protein | 0.39 | ABIE53_001368 | | trehalose 6-phosphate synthase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00347 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.39 | H281DRAFT_04389 | | trehalose 6-phosphate synthase | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS31140 | | hypothetical protein | 0.35 | RR42_RS02330 | | trehalose-6-phosphate synthase | low | > 128 |
| Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_1355 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.36 | EX28DRAFT_0656 | | alpha,alpha-trehalose-phosphate synthase [UDP-forming] | low | > 76 |
| Enterobacter sp. TBS_079 | 0.21 | MPMX20_02191 | | Outer membrane protein OprM | 0.35 | MPMX20_02804 | | Trehalose-6-phosphate synthase | low | > 85 |
| Variovorax sp. SCN45 | 0.21 | GFF3820 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | 0.38 | GFF5156 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 127 |
| Pseudomonas stutzeri RCH2 | 0.21 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.36 | Psest_1061 | | alpha,alpha-trehalose-phosphate synthase [UDP-forming] | low | > 67 |
| Bosea sp. OAE506 | 0.20 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | 0.36 | ABIE41_RS23825 | | trehalose-6-phosphate synthase | low | > 77 |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.38 | RPSI07_RS05135 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 0.48 | 69 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS27700 | | multidrug transporter | 0.36 | BWI76_RS18230 | | trehalose-6-phosphate synthase | low | > 92 |
| Ralstonia solanacearum UW163 | 0.20 | UW163_RS17275 | | RND transporter | 0.37 | UW163_RS20710 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.20 | RALBFv3_RS21910 | | RND transporter | 0.37 | RALBFv3_RS18420 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 76 |
| Rhizobium sp. OAE497 | 0.20 | ABIE40_RS15365 | | efflux transporter outer membrane subunit | 0.40 | ABIE40_RS01465 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | — | — |
| Escherichia fergusonii Becca | 0.20 | EFB2_02632 | | putative efflux pump outer membrane protein TtgC | 0.32 | EFB2_02049 | | Trehalose-6-phosphate synthase | 0.35 | 40 |
| Dyella japonica UNC79MFTsu3.2 | 0.20 | ABZR86_RS03390 | | efflux transporter outer membrane subunit | 0.38 | ABZR86_RS10955 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 74 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS07795 | | TolC family protein | 0.32 | ECOLIN_RS10810 | | alpha,alpha-trehalose-phosphate synthase | — | — |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_25710 | tolC | multidrug transporter | 0.32 | HEPCGN_04510 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 87 |
| Escherichia coli ECRC102 | 0.20 | NIAGMN_26660 | tolC | multidrug transporter | 0.32 | NIAGMN_01970 | otsA | alpha,alpha-trehalose-phosphate synthase | — | — |
| Lysobacter sp. OAE881 | 0.20 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | 0.38 | ABIE51_RS04910 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 62 |
| Escherichia coli ECRC101 | 0.20 | MCAODC_15780 | tolC | multidrug transporter | 0.32 | MCAODC_19315 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 87 |
| Escherichia coli ECRC98 | 0.20 | JDDGAC_05035 | tolC | multidrug transporter | 0.32 | JDDGAC_00665 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 86 |
| Escherichia coli ECRC99 | 0.20 | KEDOAH_26285 | tolC | multidrug transporter | 0.32 | KEDOAH_02015 | otsA | alpha,alpha-trehalose-phosphate synthase | — | — |
| Erwinia tracheiphila SCR3 | 0.20 | LU632_RS09495 | | efflux transporter outer membrane subunit | 0.34 | LU632_RS13590 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 74 |
| Pantoea sp. MT58 | 0.19 | IAI47_13160 | | efflux transporter outer membrane subunit | 0.35 | IAI47_08275 | | alpha,alpha-trehalose-phosphate synthase | low | > 76 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.32 | NOLOHH_16530 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.19 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.38 | RS_RS22450 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 80 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.32 | BNILDI_15320 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 75 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | 0.38 | ABZR87_RS19430 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_00688 | | Outer membrane protein OprM | 0.30 | MPMX26_02458 | | Trehalose-6-phosphate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.19 | Xcc-8004.3526.1 | | Outer membrane component of tripartite multidrug resistance system | 0.35 | Xcc-8004.1369.1 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 74 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.32 | OKFHMN_26090 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 80 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.19 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | 0.32 | GFF1675 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 78 |
| Escherichia coli BL21 | 0.18 | ECD_00533 | | copper/silver efflux system, outer membrane component | 0.32 | ECD_01865 | | trehalose-6-phosphate synthase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.18 | OHPLBJKB_03137 | | Cation efflux system protein CusC | 0.32 | OHPLBJKB_01832 | | Trehalose-6-phosphate synthase | 0.33 | 13 |
| Variovorax sp. OAS795 | 0.18 | ABID97_RS10170 | | efflux transporter outer membrane subunit | 0.39 | ABID97_RS06565 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 91 |
| Escherichia coli BW25113 | 0.18 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | 0.32 | b1896 | otsA | trehalose-6-phosphate synthase (NCBI) | low | > 76 |
Not shown: 43 genomes with orthologs for TX73_013300 only; 7 genomes with orthologs for TX73_024225 only