| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_012035 | | ABC transporter substrate-binding protein | 1.0 | TX73_012015 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.83 | 1 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS23015 | | peptide ABC transporter substrate-binding protein | 0.62 | AZOBR_RS19630 | | 4-aminobutyrate aminotransferase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_02825 | | Oligopeptide-binding protein AppA | 0.59 | MPMX19_04919 | | 5-aminovalerate aminotransferase DavT | low | > 112 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS27430 | | peptide ABC transporter substrate-binding protein | 0.59 | RR42_RS21370 | | 4-aminobutyrate aminotransferase | low | > 128 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_006408 | | peptide/nickel transport system substrate-binding protein | 0.56 | ABIE53_004117 | | 4-aminobutyrate aminotransferase | low | > 113 |
| Pectobacterium carotovorum WPP14 | 0.34 | HER17_RS16445 | | ABC transporter substrate-binding protein | 0.54 | HER17_RS09880 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 75 |
| Pseudomonas fluorescens SBW25-INTG | 0.33 | PFLU_RS10915 | | ABC transporter substrate-binding protein | 0.53 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 109 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS12365 | | ABC transporter substrate-binding protein | 0.54 | DZA65_RS12405 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 75 |
| Pseudomonas fluorescens SBW25 | 0.33 | PFLU_RS10915 | | ABC transporter substrate-binding protein | 0.53 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 109 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS11825 | | ABC transporter substrate-binding protein | 0.53 | HGI48_RS11860 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 71 |
| Variovorax sp. SCN45 | 0.32 | GFF4128 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | 0.53 | GFF921 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | low | > 127 |
| Sinorhizobium meliloti 1021 | 0.31 | SMa2075 | | ABC transporter substrate-binding protein | 0.52 | SM_b21186 | | 4-aminobutyrate aminotransferase | low | > 103 |
| Rahnella sp. WP5 | 0.17 | EX31_RS02025 | | ABC transporter substrate-binding protein | 0.52 | EX31_RS00095 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 89 |
| Rhizobium sp. OAE497 | 0.16 | ABIE40_RS24180 | | ABC transporter substrate-binding protein | 0.53 | ABIE40_RS00145 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 107 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS06935 | | ABC transporter substrate-binding protein | 0.54 | DDA3937_RS11830 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 74 |
| Klebsiella michiganensis M5al | 0.16 | BWI76_RS19180 | | diguanylate cyclase | 0.55 | BWI76_RS26375 | | aspartate aminotransferase family protein | low | > 92 |
| Escherichia coli ECRC99 | 0.16 | KEDOAH_27125 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | KEDOAH_07230 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | — | — |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_03810 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | JDDGAC_24570 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 86 |
| Escherichia coli ECOR38 | 0.16 | HEPCGN_26475 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | HEPCGN_20155 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 87 |
| Escherichia coli ECRC62 | 0.16 | BNILDI_17445 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | BNILDI_11295 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 75 |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_25450 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | NIAGMN_18675 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | — | — |
| Escherichia coli ECRC100 | 0.16 | OKFHMN_01320 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | OKFHMN_20910 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 80 |
| Escherichia coli ECRC101 | 0.16 | MCAODC_16620 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | MCAODC_11430 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 87 |
| Escherichia coli BW25113 | 0.16 | b1487 | ddpA | D-ala-D-a la transporter subunit (NCBI) | 0.53 | b2662 | gabT | 4-aminobutyrate aminotransferase (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_02230 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | OHPLBJKB_01070 | | 4-aminobutyrate aminotransferase GabT | low | > 73 |
| Escherichia coli BL21 | 0.16 | ECD_01445 | | D,D-dipeptide ABC transporter periplasmic binding protein | 0.53 | ECD_02518 | | 4-aminobutyrate aminotransferase, PLP-dependent | low | > 61 |
| Escherichia coli ECOR27 | 0.15 | NOLOHH_18960 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.53 | NOLOHH_12735 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.15 | MPMX20_02356 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.51 | MPMX20_04337 | | 4-aminobutyrate aminotransferase PuuE | low | > 85 |
| Variovorax sp. OAS795 | 0.15 | ABID97_RS11660 | | ABC transporter substrate-binding protein | 0.57 | ABID97_RS21585 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 91 |
| Pseudomonas fluorescens FW300-N2E2 | 0.15 | Pf6N2E2_3427 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein | 0.53 | Pf6N2E2_4013 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.15 | AO353_21850 | | diguanylate cyclase | 0.53 | AO353_11510 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | low | > 101 |
| Pseudomonas syringae pv. syringae B728a | 0.15 | Psyr_4211 | | extracellular solute-binding protein, family 5 | 0.50 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.15 | Psyr_4211 | | extracellular solute-binding protein, family 5 | 0.50 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.15 | Pf1N1B4_5106 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein | 0.53 | Pf1N1B4_1733 | | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | low | > 87 |
| Serratia liquefaciens MT49 | 0.15 | IAI46_12025 | | ABC transporter substrate-binding protein | 0.52 | IAI46_22165 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.14 | AO356_07725 | | diguanylate cyclase | 0.53 | AO356_10715 | | 4-aminobutyrate aminotransferase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.14 | PS417_27765 | | peptide ABC transporter substrate-binding protein | 0.53 | PS417_00900 | | 4-aminobutyrate aminotransferase | low | > 88 |
| Ralstonia sp. UNC404CL21Col | 0.13 | ABZR87_RS14620 | | ABC transporter substrate-binding protein | 0.55 | ABZR87_RS05190 | | 4-aminobutyrate--2-oxoglutarate transaminase | low | > 80 |
| Pseudomonas putida KT2440 | 0.13 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | 0.55 | PP_0214 | | 4-aminobutyrate aminotransferase | low | > 96 |
| Shewanella loihica PV-4 | 0.13 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | 0.51 | Shew_3172 | | 4-aminobutyrate aminotransferase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.12 | Shewana3_2650 | | acetate kinase (RefSeq) | 0.49 | Shewana3_3091 | | 4-aminobutyrate aminotransferase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.11 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | 0.48 | SO1276 | gabT | 4-aminobutyrate aminotransferase (NCBI ptt file) | low | > 76 |
Not shown: 8 genomes with orthologs for TX73_012035 only; 26 genomes with orthologs for TX73_012015 only