Conservation of cofitness between TX73_023700 and TX73_010500 in Rhodopseudomonas palustris CGA009

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_023700 2-dehydropantoate 2-reductase 1.0 TX73_010500 SDR family oxidoreductase 0.46 17
Bosea sp. OAE506 0.55 ABIE41_RS11280 2-dehydropantoate 2-reductase 0.20 ABIE41_RS17685 oxidoreductase low > 77
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS14995 2-dehydropantoate 2-reductase 0.22 QEN71_RS06595 oxidoreductase low > 153
Variovorax sp. SCN45 0.52 GFF3590 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.21 GFF6514 Short-chain dehydrogenase low > 127
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_01683 ketopantoate reductase (EC 1.1.1.169) 0.18 H281DRAFT_00662 Short-chain dehydrogenase low > 103
Pseudomonas putida KT2440 0.24 PP_2998 2-dehydropantoate 2-reductase 0.23 PP_1274 Oxidoreductase, short-chain dehydrogenase/reductase family low > 96
Azospirillum brasilense Sp245 0.24 AZOBR_RS12955 2-dehydropantoate 2-reductase 0.19 AZOBR_RS32755 short-chain dehydrogenase — —
Ralstonia solanacearum GMI1000 0.22 RS_RS23145 2-dehydropantoate 2-reductase 0.21 RS_RS19935 oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.22 RPSI07_RS05730 2-dehydropantoate 2-reductase 0.21 RPSI07_RS06900 oxidoreductase low > 81
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_11730 2-dehydropantoate 2-reductase 0.20 CSW01_05000 short-chain dehydrogenase low > 62
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS32960 2-dehydropantoate 2-reductase 0.18 RR42_RS29305 short-chain dehydrogenase low > 128
Caulobacter crescentus NA1000 0.19 CCNA_00262 ketopantoate reductase panE/ApbA family protein 0.52 CCNA_02954 11-cis retinol dehydrogenase low > 66
Ralstonia solanacearum UW163 0.19 UW163_RS21310 2-dehydropantoate 2-reductase 0.22 UW163_RS18265 oxidoreductase — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00262 ketopantoate reductase panE/ApbA family protein 0.52 CCNA_02954 11-cis retinol dehydrogenase low > 67
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS17830 2-dehydropantoate 2-reductase 0.22 RALBFv3_RS16910 oxidoreductase — —
Pseudomonas sp. S08-1 0.17 OH686_01745 2-dehydropantoate 2-reductase 0.23 OH686_04825 Oxidoreductase, short-chain dehydrogenase/reductase family low > 80
Pseudomonas sp. RS175 0.17 PFR28_00963 hypothetical protein 0.22 PFR28_03569 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_2074 ketopantoate reductase 0.21 Psyr_1049 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_2074 ketopantoate reductase 0.21 Psyr_1049 Short-chain dehydrogenase/reductase SDR low > 86
Enterobacter sp. TBS_079 0.16 MPMX20_01144 2-dehydropantoate 2-reductase 0.21 MPMX20_01091 hypothetical protein low > 85
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_2468 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.22 Pf6N2E2_5375 Oxidoreductase, short chain dehydrogenase/reductase family low > 103
Escherichia coli ECOR38 0.15 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.20 HEPCGN_06610 ybbO NADP(+)-dependent aldehyde reductase low > 87
Escherichia coli BW25113 0.15 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.20 b0493 ybbO short chain dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.15 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.20 BNILDI_22390 ybbO NADP(+)-dependent aldehyde reductase low > 75
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS12305 2-dehydropantoate 2-reductase 0.27 ABZR86_RS17700 oxidoreductase low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.20 OHPLBJKB_03181 hypothetical protein low > 73
Escherichia coli BL21 0.15 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.20 ECD_00444 putative oxidoreductase low > 61
Escherichia coli ECOR27 0.15 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.20 NOLOHH_00970 ybbO NADP(+)-dependent aldehyde reductase low > 75
Escherichia coli Nissle 1917 0.15 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.20 ECOLIN_RS02915 NADP(+)-dependent aldehyde reductase low > 55
Escherichia fergusonii Becca 0.15 EFB2_03632 2-dehydropantoate 2-reductase 0.20 EFB2_03562 hypothetical protein low > 86
Escherichia coli ECRC98 0.15 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.20 JDDGAC_11625 ybbO NADP(+)-dependent aldehyde reductase 0.82 23
Escherichia coli ECRC99 0.15 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.20 KEDOAH_19990 ybbO NADP(+)-dependent aldehyde reductase — —
Escherichia coli ECRC100 0.15 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.20 OKFHMN_07980 ybbO NADP(+)-dependent aldehyde reductase low > 80
Dickeya dianthicola 67-19 0.15 HGI48_RS06950 oxidoreductase 0.20 HGI48_RS06005 SDR family oxidoreductase low > 71
Escherichia coli ECRC102 0.15 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.20 NIAGMN_06030 ybbO NADP(+)-dependent aldehyde reductase — —
Escherichia coli ECRC101 0.15 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.20 MCAODC_27195 ybbO NADP(+)-dependent aldehyde reductase low > 87
Pseudomonas fluorescens SBW25 0.15 PFLU_RS08395 putative 2-dehydropantoate 2-reductase 0.22 PFLU_RS04840 SDR family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS08395 putative 2-dehydropantoate 2-reductase 0.22 PFLU_RS04840 SDR family oxidoreductase low > 109
Pseudomonas simiae WCS417 0.15 PS417_08445 2-dehydropantoate 2-reductase 0.23 PS417_04775 short-chain dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_286 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.21 Pf1N1B4_996 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Enterobacter asburiae PDN3 0.14 EX28DRAFT_2416 2-dehydropantoate 2-reductase 0.22 EX28DRAFT_2466 Short-chain dehydrogenases of various substrate specificities — —
Dickeya dianthicola ME23 0.14 DZA65_RS07295 oxidoreductase 0.20 DZA65_RS06350 SDR family oxidoreductase low > 75
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_2227 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.21 PfGW456L13_1672 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Dickeya dadantii 3937 0.14 DDA3937_RS11860 oxidoreductase 0.21 DDA3937_RS05955 SDR family oxidoreductase low > 74
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_03195 2-dehydropantoate 2-reductase 0.22 AO356_17250 short-chain dehydrogenase low > 104
Pectobacterium carotovorum WPP14 0.14 HER17_RS13760 oxidoreductase 0.21 HER17_RS15505 SDR family oxidoreductase low > 75
Erwinia tracheiphila SCR3 0.13 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.18 LU632_RS15270 SDR family oxidoreductase low > 74
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_19045 2-dehydropantoate 2-reductase 0.22 AO353_04800 short-chain dehydrogenase low > 101
Klebsiella michiganensis M5al 0.12 BWI76_RS14790 2-dehydropantoate 2-reductase 0.19 BWI76_RS06940 short-chain dehydrogenase/reductase — —
Serratia liquefaciens MT49 0.12 IAI46_04950 2-dehydropantoate 2-reductase 0.19 IAI46_05340 SDR family oxidoreductase low > 86

Not shown: 22 genomes with orthologs for TX73_023700 only; 13 genomes with orthologs for TX73_010500 only