Conservation of cofitness between SMc02641 and SM_b20942 in Sinorhizobium meliloti 1021

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02641 UDP-glucose 6-dehydrogenase 1.0 SM_b20942 UDP glucose 4-epimerase 0.41 16
Agrobacterium fabrum C58 0.82 Atu4149 UDP-glucose 6-dehydrogenase 0.82 Atu4166 UDP-glucose 4-epimerase low > 89
Rhizobium sp. OAE497 0.72 ABIE40_RS14850 UDP-glucose/GDP-mannose dehydrogenase family protein 0.83 ABIE40_RS18880 UDP-glucose 4-epimerase GalE low > 107
Caulobacter crescentus NA1000 0.69 CCNA_02464 UDP-glucose 6-dehydrogenase 0.64 CCNA_02466 UDP-glucose 4-epimerase low > 66
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_02464 UDP-glucose 6-dehydrogenase 0.64 CCNA_02466 UDP-glucose 4-epimerase low > 67
Azospirillum sp. SherDot2 0.66 MPMX19_05339 UDP-glucose 6-dehydrogenase 0.42 MPMX19_04151 UDP-glucose 4-epimerase — —
Phaeobacter inhibens DSM 17395 0.61 PGA1_65p00450 UDP-glucose 6-dehydrogenase Ugd 0.51 PGA1_c34470 UDP-glucose 4-epimerase ExoB low > 62
Paraburkholderia graminis OAS925 0.48 ABIE53_002181 UDPglucose 6-dehydrogenase 0.35 ABIE53_001185 UDP-glucose 4-epimerase low > 113
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS14820 UDP-glucose/GDP-mannose dehydrogenase family protein 0.34 ABI39_RS20070 UDP-glucose 4-epimerase GalE low > 72
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS09715 UDP-glucose 6-dehydrogenase 0.36 BPHYT_RS04450 UDP-glucose 4-epimerase low > 109
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS17430 UDP-glucose/GDP-mannose dehydrogenase family protein 0.32 ABZR88_RS08705 UDP-glucose 4-epimerase GalE — —
Phocaeicola vulgatus CL09T03C04 0.48 HMPREF1058_RS01255 UDP-glucose/GDP-mannose dehydrogenase family protein 0.34 HMPREF1058_RS06310 UDP-glucose 4-epimerase GalE low > 67
Ralstonia solanacearum PSI07 0.48 RPSI07_RS19665 UDP-glucose/GDP-mannose dehydrogenase family protein 0.36 RPSI07_RS05120 UDP-glucose 4-epimerase GalE — —
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS17435 UDP-glucose/GDP-mannose dehydrogenase family protein 0.33 HMPREF1078_RS15420 UDP-glucose 4-epimerase GalE — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein 0.35 ABZR87_RS19470 UDP-glucose 4-epimerase GalE — —
Ralstonia solanacearum UW163 0.47 UW163_RS16005 UDP-glucose/GDP-mannose dehydrogenase family protein 0.36 UW163_RS20695 UDP-glucose 4-epimerase GalE — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS13805 UDP-glucose/GDP-mannose dehydrogenase family protein 0.36 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS21735 UDP-glucose/GDP-mannose dehydrogenase family protein 0.36 QEN71_RS25435 UDP-glucose 4-epimerase GalE low > 153
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_4404 nucleotide sugar dehydrogenase 0.39 Echvi_1472 UDP-glucose 4-epimerase (EC 5.1.3.2) (from data) low > 79
Ralstonia solanacearum GMI1000 0.47 RS_RS04540 UDP-glucose/GDP-mannose dehydrogenase family protein 0.36 RS_RS22435 UDP-glucose 4-epimerase GalE — —
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS10010 UDP-glucose 6-dehydrogenase 0.40 HSERO_RS22045 UDP-glucose 4-epimerase low > 78
Bacteroides stercoris CC31F 0.47 HMPREF1181_RS14375 UDP-glucose/GDP-mannose dehydrogenase family protein 0.34 HMPREF1181_RS15095 UDP-glucose 4-epimerase GalE — —
Bacteroides thetaiotaomicron VPI-5482 0.46 BT1341 UDP-glucose 6-dehydrogenase (NCBI ptt file) 0.34 BT0623 putative UDP-glucose 4-epimerase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.46 BACOVA_02564 nucleotide sugar dehydrogenase 0.34 BACOVA_02242 UDP-glucose 4-epimerase — —
Variovorax sp. OAS795 0.45 ABID97_RS11855 UDP-glucose/GDP-mannose dehydrogenase family protein 0.37 ABID97_RS05765 UDP-glucose 4-epimerase GalE low > 91
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_5945 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.33 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Lysobacter sp. OAE881 0.43 ABIE51_RS09065 UDP-glucose/GDP-mannose dehydrogenase family protein 0.37 ABIE51_RS07955 UDP-glucose 4-epimerase GalE low > 62
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3391.1 hypothetical protein 0.37 Xcc-8004.4678.1 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Pseudomonas putida KT2440 0.40 PP_2926 UDP-glucose 6-dehydrogenase 0.44 PP_3129 UDP-glucose 4-epimerase low > 96
Variovorax sp. SCN45 0.40 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.34 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 127
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0973 ugd UDP-glucose 6-dehydrogenase 0.57 Synpcc7942_0320 galE UDP-galactose 4-epimerase — —
Dinoroseobacter shibae DFL-12 0.23 Dshi_1896 GDP-mannose 6-dehydrogenase (RefSeq) 0.32 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) low > 64
Acinetobacter radioresistens SK82 0.20 MPMX26_00064 UDP-glucose 6-dehydrogenase 0.36 MPMX26_00066 UDP-glucose 4-epimerase low > 36
Castellaniella sp019104865 MT123 0.17 ABCV34_RS12915 nucleotide sugar dehydrogenase 0.36 ABCV34_RS10235 UDP-glucose 4-epimerase GalE low > 48

Not shown: 41 genomes with orthologs for SMc02641 only; 5 genomes with orthologs for SM_b20942 only