| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS15890 | | heme biosynthesis protein HemY | 1.0 | RR42_RS17105 | | Clp protease ClpX | 0.78 | 3 |
| Ralstonia sp. UNC404CL21Col | 0.73 | ABZR87_RS16125 | | heme biosynthesis protein HemY | 0.92 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.45 | 49 |
| Ralstonia solanacearum IBSBF1503 | 0.73 | RALBFv3_RS04235 | | heme biosynthesis protein HemY | 0.92 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum PSI07 | 0.73 | RPSI07_RS13115 | | heme biosynthesis protein HemY | 0.92 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 81 |
| Ralstonia solanacearum UW163 | 0.73 | UW163_RS09435 | | heme biosynthesis protein HemY | 0.92 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS11825 | | heme biosynthesis protein HemY | 0.93 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_00200 | | HemY protein | 0.85 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS05240 | | heme biosynthesis protein HemY | 0.85 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS24940 | | heme biosynthesis protein HemY | 0.85 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS14650 | | porphyrin biosynthesis protein | 0.87 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Dechlorosoma suillum PS | 0.23 | Dsui_1599 | | putative enzyme of heme biosynthesis | 0.77 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.14 | Ac3H11_3549 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.81 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.81 | 2 |
| Pseudomonas fluorescens FW300-N2E2 | 0.13 | Pf6N2E2_4433 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.63 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.29 | 48 |
| Variovorax sp. OAS795 | 0.13 | ABID97_RS08240 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.81 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.56 | 2 |
| Pseudomonas fluorescens FW300-N2E3 | 0.12 | AO353_08975 | | heme biosynthesis protein HemY | 0.63 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.12 | AO356_12800 | | heme biosynthesis protein HemY | 0.63 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.28 | 66 |
| Pseudomonas fluorescens GW456-L13 | 0.12 | PfGW456L13_859 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.63 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Kangiella aquimarina DSM 16071 | 0.12 | B158DRAFT_0255 | | Uncharacterized enzyme of heme biosynthesis | 0.61 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 40 |
| Pseudomonas fluorescens FW300-N1B4 | 0.12 | Pf1N1B4_2188 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.63 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.64 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.37 | 39 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.64 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.11 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.64 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.11 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.64 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas sp. RS175 | 0.11 | PFR28_04363 | | Protein HemY | 0.64 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 88 |
| Pseudomonas simiae WCS417 | 0.11 | PS417_27515 | | heme biosynthesis protein HemY | 0.64 | PS417_16510 | | Clp protease ClpX | low | > 88 |
| Pseudomonas putida KT2440 | 0.10 | PP_0189 | | putative heme biosynthesis protein | 0.63 | PP_4008 | | ATP-dependent serine protease | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.10 | Psest_3745 | | Uncharacterized enzyme of heme biosynthesis | 0.63 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | low | > 67 |
| Pseudomonas sp. S08-1 | 0.10 | OH686_13915 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.63 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.09 | GFF119 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.81 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 90 |
| Marinobacter adhaerens HP15 | 0.08 | HP15_237 | | HemY domain protein | 0.64 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Enterobacter sp. TBS_079 | 0.07 | MPMX20_04473 | | Protein HemY | 0.64 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Serratia liquefaciens MT49 | 0.07 | IAI46_00680 | | protoheme IX biogenesis protein HemY | 0.62 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Variovorax sp. SCN45 | 0.07 | GFF3842 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.81 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 127 |
Not shown: 1 genomes with orthologs for RR42_RS15890 only; 57 genomes with orthologs for RR42_RS17105 only