Conservation of cofitness between RR42_RS27685 and RR42_RS11195 in Cupriavidus basilensis FW507-4G11

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS27685 multidrug efflux RND transporter permease subunit 1.0 RR42_RS11195 phosphohydrolase 0.30 9
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS19400 efflux RND transporter permease subunit 0.51 ABZR87_RS08200 HD-GYP domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.76 RPSI07_RS05175 multidrug efflux RND transporter permease subunit 0.52 RPSI07_RS21040 HD-GYP domain-containing protein low > 81
Ralstonia solanacearum UW163 0.75 UW163_RS20755 multidrug efflux RND transporter permease subunit 0.52 UW163_RS01330 HD-GYP domain-containing protein — —
Ralstonia solanacearum GMI1000 0.75 RS_RS22490 multidrug efflux RND transporter permease subunit 0.51 RS_RS02965 HD-GYP domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit 0.52 RALBFv3_RS12275 HD-GYP domain-containing protein low > 76
Acidovorax sp. GW101-3H11 0.72 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein 0.40 Ac3H11_780 HDIG domain protein low > 79
Dechlorosoma suillum PS 0.70 Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter 0.44 Dsui_0643 HD-GYP domain-containing protein low > 51
Rhizobium sp. OAE497 0.70 ABIE40_RS14875 multidrug efflux RND transporter permease subunit 0.25 ABIE40_RS13525 HD-GYP domain-containing protein low > 107
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS01560 transporter 0.39 HSERO_RS23735 phosphodiesterase low > 78
Agrobacterium fabrum C58 0.67 Atu2483 AcrB/AcrD/AcrF family protein 0.25 Atu2291 hypothetical protein low > 89
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.37 Psyr_0994 Metal-dependent phosphohydrolase, HD subdomain protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_27605 transporter 0.39 AO356_29890 phosphodiesterase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.37 Psyr_0994 Metal-dependent phosphohydrolase, HD subdomain protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_824 Multidrug efflux transporter MexF 0.39 Pf6N2E2_1785 HDIG domain protein low > 103
Pseudomonas stutzeri RCH2 0.64 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.38 Psest_4130 uncharacterized domain HDIG low > 67
Pseudomonas sp. S08-1 0.63 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.41 OH686_14780 HD-GYP domain low > 80
Shewanella sp. ANA-3 0.62 Shewana3_1078 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.23 Shewana3_4069 metal dependent phosphohydrolase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO3492 mexF RND multidrug efflux transporter MexF (NCBI ptt file) 0.23 SO4711 HD domain protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.59 MIT1002_02998 Efflux pump membrane transporter BepE 0.23 MIT1002_04107 Cyclic di-GMP phosphodiesterase response regulator RpfG low > 70
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB 0.38 Xcc-8004.460.1 HDIG domain protein low > 74
Pantoea sp. MT58 0.58 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB 0.34 IAI47_01225 HD-GYP domain-containing protein low > 76
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) 0.24 DvMF_1719 metal dependent phosphohydrolase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.46 DVU0061 multidrug resistance protein, putative (TIGR) 0.23 DVU0491 HDIG domain protein (TIGR) low > 55
Shewanella loihica PV-4 0.45 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.23 Shew_3670 metal dependent phosphohydrolase (RefSeq) low > 60

Not shown: 34 genomes with orthologs for RR42_RS27685 only; 5 genomes with orthologs for RR42_RS11195 only