| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS37445 | | LysR family transcriptional regulator | 1.0 | QEN71_RS37805 | | nitrite reductase small subunit NirD | 0.39 | 15 |
| Burkholderia phytofirmans PsJN | 0.81 | BPHYT_RS30350 | | LysR family transcriptional regulator | 0.78 | BPHYT_RS09845 | | nitrite reductase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01092 | | transcriptional regulator, LysR family | 0.78 | H281DRAFT_00663 | | assimilatory nitrite reductase (NAD(P)H) small subunit (EC 1.7.1.4) | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_002240 | | DNA-binding transcriptional LysR family regulator | 0.80 | ABIE53_001854 | | nitrite reductase (NADH) small subunit | low | > 113 |
| Dechlorosoma suillum PS | 0.46 | Dsui_1258 | | transcriptional regulator | 0.22 | Dsui_1826 | | NAD(P)H-dependent nitrite reductase, small subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS14560 | | LysR substrate-binding domain-containing protein | 0.62 | ABZR86_RS03860 | | Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS13590 | | LysR family transcriptional regulator | 0.67 | RPSI07_RS05605 | | nitrite reductase (NAD(P)H) small subunit | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS14800 | | LysR family transcriptional regulator | 0.65 | RR42_RS31790 | | nitrite reductase | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS11085 | | LysR family transcriptional regulator | 0.66 | RS_RS23030 | | nitrite reductase (NAD(P)H) small subunit | low | > 80 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS10030 | | LysR family transcriptional regulator | 0.68 | UW163_RS21130 | | nitrite reductase (NAD(P)H) small subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS03640 | | LysR family transcriptional regulator | 0.68 | RALBFv3_RS18000 | | nitrite reductase (NAD(P)H) small subunit | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS15530 | | LysR substrate-binding domain-containing protein | 0.67 | ABZR87_RS18875 | | nitrite reductase small subunit NirD | low | > 80 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_07350 | | LysR family transcriptional regulator | 0.44 | IAI46_23660 | | nitrite reductase small subunit NirD | low | > 86 |
| Rahnella sp. WP5 | 0.40 | EX31_RS05190 | | LysR family transcriptional regulator | 0.40 | EX31_RS04675 | | nitrite reductase small subunit NirD | low | > 89 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS06255 | | LysR family transcriptional regulator | 0.41 | BWI76_RS26045 | | nitrite reductase small subunit | low | > 92 |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_0543 | | Transcriptional regulator | 0.34 | EX28DRAFT_4161 | | nitrite reductase [NAD(P)H], small subunit | low | > 76 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS11920 | | LysR substrate-binding domain-containing protein | 0.40 | ECOLIN_RS19275 | | nitrite reductase small subunit NirD | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_01685 | | HTH-type transcriptional regulator YhaJ | 0.40 | OHPLBJKB_00336 | | Nitrite reductase (NADH) small subunit | low | > 73 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_24535 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | OKFHMN_17190 | nirD | nitrite reductase small subunit NirD | low | > 80 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_14760 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | BNILDI_02530 | nirD | nitrite reductase small subunit NirD | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS17845 | | LysR family transcriptional regulator | 0.60 | HSERO_RS14540 | | nitrite reductase | low | > 78 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_28645 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | JDDGAC_20820 | nirD | nitrite reductase small subunit NirD | low | > 86 |
| Escherichia fergusonii Becca | 0.38 | EFB2_01841 | | HTH-type transcriptional regulator YhaJ | 0.40 | EFB2_00456 | | Nitrite reductase (NADH) small subunit | low | > 86 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_03615 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | KEDOAH_10950 | nirD | nitrite reductase small subunit NirD | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_22480 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | NIAGMN_14960 | nirD | nitrite reductase small subunit NirD | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_20405 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | MCAODC_07720 | nirD | nitrite reductase small subunit NirD | low | > 87 |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_15860 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | NOLOHH_08990 | nirD | nitrite reductase small subunit NirD | low | > 75 |
| Escherichia coli BL21 | 0.38 | ECD_01918 | | LysR family putative transcriptional regulator | 0.40 | ECD_03217 | | nitrite reductase (NADH) small subunit | low | > 61 |
| Escherichia coli BW25113 | 0.38 | b2015 | yeeY | putative transcriptional regulator LYSR-type (VIMSS) | 0.40 | b3366 | nirD | nitrite reductase small subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_03240 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.40 | HEPCGN_16020 | nirD | nitrite reductase small subunit NirD | low | > 87 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_02999 | | HTH-type transcriptional regulator YhaJ | 0.41 | MPMX20_04270 | | Nitrite reductase (NADH) small subunit | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3915 | | Hypothetical transcriptional regulator yeeY | 0.41 | GFF3703 | | Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.31 | HER17_RS18770 | | LysR family transcriptional regulator | 0.45 | HER17_RS01840 | | nitrite reductase small subunit NirD | low | > 75 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_08030 | | transcriptional regulator | 0.44 | PS417_14725 | | Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS08000 | | LysR family transcriptional regulator | 0.43 | PFLU_RS16710 | | nitrite reductase small subunit NirD | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS08000 | | LysR family transcriptional regulator | 0.43 | PFLU_RS16710 | | nitrite reductase small subunit NirD | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_3825 | | transcriptional regulator, LysR family | 0.39 | Psyr_3100 | | nitrite reductase [NAD(P)H], small subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_3825 | | transcriptional regulator, LysR family | 0.39 | Psyr_3100 | | nitrite reductase [NAD(P)H], small subunit | — | — |
| Pseudomonas sp. S08-1 | 0.19 | OH686_05450 | | Transcriptional regulator, LysR family | 0.41 | OH686_20570 | | Nitrite reductase [NAD(P)H] small subunit | low | > 80 |
| Pseudomonas sp. RS175 | 0.18 | PFR28_00748 | | HTH-type transcriptional regulator YhaJ | 0.39 | PFR28_01857 | | Nitrite reductase (NADH) small subunit | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.18 | Pf1N1B4_548 | | Transcriptional regulator, LysR family | 0.42 | Pf1N1B4_5041 | | Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.18 | Psest_1624 | | Transcriptional regulator | 0.41 | Psest_2407 | | nitrite reductase [NAD(P)H], small subunit | low | > 67 |
| Pseudomonas putida KT2440 | 0.17 | PP_4539 | | Transcriptional regulator, LysR family | 0.39 | PP_1706 | | Nitrite reductase | low | > 96 |
| Alteromonas macleodii MIT1002 | 0.16 | MIT1002_02374 | | HTH-type transcriptional activator AllS | 0.44 | MIT1002_00699 | | Nitrite reductase [NAD(P)H] small subunit | low | > 70 |
Not shown: 28 genomes with orthologs for QEN71_RS37445 only; 5 genomes with orthologs for QEN71_RS37805 only