Conservation of cofitness between QEN71_RS28660 and QEN71_RS24890 in Paraburkholderia sabiae LMG 24235

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS28660 5-oxoprolinase subunit PxpA 1.0 QEN71_RS24890 P-II family nitrogen regulator 0.70 12
Paraburkholderia graminis OAS925 0.93 ABIE53_000049 UPF0271 protein 0.97 ABIE53_001346 nitrogen regulatory protein P-II 1 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_05811 UPF0271 protein 0.97 H281DRAFT_00219 nitrogen regulatory protein P-II family low > 103
Burkholderia phytofirmans PsJN 0.92 BPHYT_RS18635 LamB/YcsF family protein 0.97 BPHYT_RS05485 nitrogen regulatory protein P-II 1 low > 109
Ralstonia solanacearum PSI07 0.69 RPSI07_RS13790 LamB/YcsF family protein 0.87 RPSI07_RS13170 nitrogen regulatory protein P-II 1 — —
Variovorax sp. OAS795 0.69 ABID97_RS23840 5-oxoprolinase subunit PxpA 0.83 ABID97_RS14850 P-II family nitrogen regulator low > 91
Ralstonia solanacearum UW163 0.68 UW163_RS10245 LamB/YcsF family protein 0.86 UW163_RS09490 nitrogen regulatory protein P-II 1 — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS03425 LamB/YcsF family protein 0.86 RALBFv3_RS04180 nitrogen regulatory protein P-II 1 — —
Ralstonia solanacearum GMI1000 0.68 RS_RS10885 LamB/YcsF family protein 0.87 RS_RS11770 nitrogen regulatory protein P-II 1 low > 80
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS15325 5-oxoprolinase subunit PxpA 0.84 ABZR87_RS16080 P-II family nitrogen regulator low > 80
Variovorax sp. SCN45 0.66 GFF2324 Lactam utilization protein LamB 0.83 GFF1151 Nitrogen regulatory protein P-II low > 127
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS00650 hypothetical protein 0.87 RR42_RS04300 nitrogen regulatory protein P-II 1 low > 128
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS08780 LamB/YcsF family protein 0.78 HSERO_RS09460 nitrogen regulatory protein P-II 1 — —
Escherichia coli ECRC98 0.61 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA 0.81 JDDGAC_25165 glnB nitrogen regulatory protein P-II low > 86
Escherichia coli ECRC99 0.61 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA 0.81 KEDOAH_06720 glnB nitrogen regulatory protein P-II — —
Escherichia coli ECRC101 0.61 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA 0.81 MCAODC_12030 glnB nitrogen regulatory protein P-II low > 87
Escherichia coli ECRC62 0.61 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA 0.81 BNILDI_11975 glnB nitrogen regulatory protein P-II low > 75
Escherichia coli ECRC102 0.61 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA 0.81 NIAGMN_19270 glnB nitrogen regulatory protein P-II — —
Escherichia coli BL21 0.61 ECD_00673 UPF0271 family protein 0.81 ECD_02445 regulatory protein P-II for glutamine synthetase low > 61
Escherichia coli ECRC100 0.61 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA 0.81 OKFHMN_21500 glnB nitrogen regulatory protein P-II low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03004 hypothetical protein 0.81 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 low > 73
Escherichia coli ECOR27 0.61 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA 0.81 NOLOHH_13175 glnB nitrogen regulatory protein P-II low > 75
Escherichia coli BW25113 0.61 b0713 ybgL hypothetical protein (NCBI) 0.81 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) low > 76
Escherichia fergusonii Becca 0.61 EFB2_03390 5-oxoprolinase subunit A 0.81 EFB2_01343 Nitrogen regulatory protein P-II 1 low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS03815 5-oxoprolinase subunit PxpA 0.81 ECOLIN_RS14450 nitrogen regulatory protein P-II — —
Escherichia coli ECOR38 0.61 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.81 HEPCGN_20645 glnB nitrogen regulatory protein P-II low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF4618 Lactam utilization protein LamB 0.81 GFF2454 Nitrogen regulatory protein P-II low > 78
Klebsiella michiganensis M5al 0.59 BWI76_RS08360 LamB/YcsF family protein 0.81 BWI76_RS21245 nitrogen regulatory protein P-II low > 92
Rahnella sp. WP5 0.59 EX31_RS23395 5-oxoprolinase subunit PxpA 0.79 EX31_RS20610 nitrogen regulatory protein P-II low > 89
Serratia liquefaciens MT49 0.58 IAI46_06225 5-oxoprolinase subunit PxpA 0.79 IAI46_19450 nitrogen regulatory protein P-II low > 86
Pantoea sp. MT58 0.58 IAI47_13795 5-oxoprolinase subunit PxpA 0.78 IAI47_04950 nitrogen regulatory protein P-II low > 76
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B 0.82 EX28DRAFT_0097 nitrogen regulatory protein P-II family low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS14975 5-oxoprolinase subunit PxpA 0.80 HER17_RS05930 nitrogen regulatory protein P-II low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS06425 5-oxoprolinase subunit PxpA 0.82 DDA3937_RS15635 nitrogen regulatory protein P-II low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS06470 5-oxoprolinase subunit PxpA 0.81 HGI48_RS15730 nitrogen regulatory protein P-II low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS06815 5-oxoprolinase subunit PxpA 0.81 DZA65_RS16810 nitrogen regulatory protein P-II low > 75
Enterobacter sp. TBS_079 0.54 MPMX20_01347 5-oxoprolinase subunit A 0.82 MPMX20_03422 Nitrogen regulatory protein P-II low > 85
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_08790 LamB/YcsF family protein 0.27 CA264_21065 transcriptional regulator low > 74
Shewanella loihica PV-4 0.46 Shew_0006 LamB/YcsF family protein (RefSeq) 0.84 Shew_1110 nitrogen regulatory protein P-II (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_0021 hypothetical protein (RefSeq) 0.83 Sama_0935 nitrogen regulatory protein P-II (RefSeq) low > 62
Lysobacter sp. OAE881 0.40 ABIE51_RS08130 5-oxoprolinase subunit PxpA 0.75 ABIE51_RS00145 P-II family nitrogen regulator low > 62
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_18055 hypothetical protein 0.81 CSW01_11410 nitrogen regulatory protein P-II low > 62
Dinoroseobacter shibae DFL-12 0.35 Dshi_2026 LamB/YcsF family protein (RefSeq) 0.71 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) — —

Not shown: 28 genomes with orthologs for QEN71_RS28660 only; 18 genomes with orthologs for QEN71_RS24890 only