| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_1776 | | Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer | 1.0 | Psyr_4958 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | 0.42 | 10 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_1776 | | Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer | 1.00 | Psyr_4958 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.76 | Pf1N1B4_4740 | | Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) | 0.50 | Pf1N1B4_2056 | | ClpB protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.75 | AO356_27780 | | chemotaxis protein | 0.50 | AO356_12245 | | ClpV1 family T6SS ATPase | low | > 104 |
| Pseudomonas sp. DMC3 | 0.75 | GFF2689 | | Methyl-accepting chemotaxis protein McpP | 0.40 | GFF452 | | Protein ClpV1 | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.74 | GEMAOFIL_03253 | | Methyl-accepting chemotaxis protein McpP | 0.50 | GEMAOFIL_00064 | | Protein ClpV1 | low | > 96 |
| Pseudomonas sp. RS175 | 0.74 | PFR28_01688 | | Methyl-accepting chemotaxis protein McpP | 0.48 | PFR28_04464 | | Protein ClpV1 | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_772 | | Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) | 0.50 | Pf6N2E2_4327 | | ClpB protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_25765 | | chemotaxis protein | 0.50 | AO353_09620 | | ClpV1 family T6SS ATPase | low | > 101 |
| Pseudomonas orientalis W4I3 | 0.73 | QF045_RS16915 | | methyl-accepting chemotaxis protein | 0.51 | QF045_RS02335 | | type VI secretion system ATPase TssH | low | > 93 |
| Pseudomonas simiae WCS417 | 0.73 | PS417_13060 | | chemotaxis protein | 0.51 | PS417_27980 | | ATPase AAA | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS13700 | | methyl-accepting chemotaxis protein | 0.50 | PFLU_RS29660 | | type VI secretion system ATPase TssH | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS13700 | | methyl-accepting chemotaxis protein | 0.50 | PFLU_RS29660 | | type VI secretion system ATPase TssH | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.66 | COO64_RS14720 | | methyl-accepting chemotaxis protein | 0.48 | COO64_RS00480 | tssH | type VI secretion system ATPase TssH | low | > 93 |
| Pseudomonas sp. BP01 | 0.65 | JOY50_RS05730 | mcpP | methyl-accepting chemotaxis protein McpP | 0.82 | JOY50_RS19890 | tssH | type VI secretion system ATPase TssH | low | > 84 |
| Pseudomonas putida KT2440 | 0.65 | PP_2861 | | Methyl-accepting chemotaxis transducer | 0.81 | PP_3095 | | Protein ClpV1 | low | > 96 |
| Pseudomonas sp. S08-1 | 0.64 | OH686_00725 | | Methyl-accepting chemotaxis sensor/transducer protein | 0.40 | OH686_12815 | | type VI secretion ATPase, ClpV1 family | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_2112 | | Methyl-accepting chemotaxis protein | 0.41 | Psest_0125 | | type VI secretion ATPase, ClpV1 family | low | > 67 |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_01450 | | methyl-accepting chemotaxis protein | 0.40 | CSW01_14595 | | type VI secretion system ATPase TssH | low | > 62 |
| Marinobacter adhaerens HP15 | 0.30 | HP15_727 | | methyl-accepting chemotaxis sensory transducer | 0.42 | HP15_3467 | | type VI secretion ATPase, ClpV1 family | low | > 73 |
| Agrobacterium fabrum C58 | 0.25 | Atu1912 | | methyl-accepting chemotaxis protein | 0.37 | Atu4344 | | ATP-dependent Clp protease, ATP-binding subunit | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS16185 | | chemotaxis protein | 0.58 | HSERO_RS03730 | | ATPase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS32295 | | chemotaxis protein | 0.45 | RR42_RS03510 | | ATPase AAA | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.22 | RALBFv3_RS14940 | | chemotaxis protein | 0.55 | RALBFv3_RS20025 | | type VI secretion system ATPase TssH | low | > 76 |
| Ralstonia solanacearum UW163 | 0.22 | UW163_RS12410 | | chemotaxis protein | 0.55 | UW163_RS19150 | | type VI secretion system ATPase TssH | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS10130 | | methyl-accepting chemotaxis protein | 0.57 | QEN71_RS31725 | | type VI secretion system ATPase TssH | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS22110 | | membrane protein | 0.55 | BPHYT_RS24425 | | ATPase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.22 | ABZR87_RS10590 | | methyl-accepting chemotaxis protein | 0.56 | ABZR87_RS20210 | | type VI secretion system ATPase TssH | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS18435 | | chemotaxis protein | 0.55 | RPSI07_RS02950 | | type VI secretion system ATPase TssH | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS22425 | | membrane protein | 0.55 | RS_RS20700 | | type VI secretion system ATPase TssH | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.21 | ABIE53_005101 | | methyl-accepting chemotaxis protein | 0.55 | ABIE53_006453 | | type VI secretion system protein VasG | low | > 113 |
| Dickeya dianthicola 67-19 | 0.21 | HGI48_RS05870 | | cache domain-containing protein | 0.39 | HGI48_RS07990 | | type VI secretion system ATPase TssH | low | > 71 |
| Dickeya dianthicola ME23 | 0.20 | DZA65_RS06205 | | methyl-accepting chemotaxis protein | 0.39 | DZA65_RS08585 | | type VI secretion system ATPase TssH | low | > 75 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.20 | H281DRAFT_01824 | | methyl-accepting chemotaxis sensory transducer with Cache sensor | 0.55 | H281DRAFT_05369 | | type VI secretion system protein VasG | low | > 103 |
| Azospirillum sp. SherDot2 | 0.20 | MPMX19_03678 | | Methyl-accepting chemotaxis protein | 0.44 | MPMX19_03417 | | Protein ClpV1 | low | > 112 |
| Dickeya dadantii 3937 | 0.20 | DDA3937_RS05825 | | cache domain-containing protein | 0.39 | DDA3937_RS07060 | | type VI secretion system ATPase TssH | low | > 74 |
Not shown: 16 genomes with orthologs for Psyr_1776 only; 30 genomes with orthologs for Psyr_4958 only