| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0344 | | Secretion protein HlyD | 1.0 | Psyr_4242 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.45 | 10 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0344 | | Secretion protein HlyD | 1.00 | Psyr_4242 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_459 | | Efflux transporter, RND family, MFP subunit | 0.93 | PfGW456L13_5058 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.66 | GEMAOFIL_00434 | | Multidrug resistance protein MdtE | 0.90 | GEMAOFIL_01013 | | putative D,D-dipeptide transport ATP-binding protein DdpF | low | > 96 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_01040 | | RND transporter | 0.90 | PS417_04045 | | peptide ABC transporter ATP-binding protein | — | — |
| Pseudomonas orientalis W4I3 | 0.66 | QF045_RS04165 | | efflux RND transporter periplasmic adaptor subunit | 0.93 | QF045_RS07040 | | peptide ABC transporter ATP-binding protein | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS01145 | | efflux RND transporter periplasmic adaptor subunit | 0.91 | PFLU_RS04085 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS01145 | | efflux RND transporter periplasmic adaptor subunit | 0.91 | PFLU_RS04085 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas sp. DMC3 | 0.64 | GFF4213 | | Multidrug resistance protein MdtE | 0.89 | GFF5019 | | putative D,D-dipeptide transport ATP-binding protein DdpF | low | > 89 |
| Pseudomonas sp. RS175 | 0.64 | PFR28_04821 | | Multidrug resistance protein MdtE | 0.90 | PFR28_00124 | | Glutathione import ATP-binding protein GsiA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.63 | Pf1N1B4_1708 | | Efflux transporter, RND family, MFP subunit | 0.93 | Pf1N1B4_1127 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas sp. SVBP6 | 0.62 | COO64_RS00860 | | efflux RND transporter periplasmic adaptor subunit | 0.90 | COO64_RS04085 | | peptide ABC transporter ATP-binding protein | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_3951 | | Efflux transporter, RND family, MFP subunit | 0.92 | Pf6N2E2_3314 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_10395 | | RND transporter | 0.92 | AO356_07275 | | peptide ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas sp. BP01 | 0.58 | JOY50_RS28380 | | efflux RND transporter periplasmic adaptor subunit | 0.91 | JOY50_RS10945 | | peptide ABC transporter ATP-binding protein | — | — |
| Pseudomonas putida KT2440 | 0.57 | PP_5175 | | HlyD family secretion protein | 0.92 | PP_0878 | | dipeptide ABC transporter, binding subunit | low | > 96 |
| Pseudomonas aeruginosa MRSN321 | 0.51 | DY961_RS27065 | triA;inference=COORDINATES | triclosan efflux RND transporter adaptor protein TriA | 0.89 | DY961_RS23940 | | peptide ABC transporter ATP-binding protein | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.51 | DQ20_RS31600 | triA;inference=COORDINATES | triclosan efflux RND transporter adaptor protein TriA | 0.89 | DQ20_RS56405 | | peptide ABC transporter ATP-binding protein | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_24760 | | triclosan efflux RND transporter adaptor protein TriA | 0.88 | IKLFDK_01550 | | Di/tripeptide transport ATP-binding protein DppF | low | > 98 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_010100 | | efflux RND transporter periplasmic adaptor subunit | 0.44 | TX73_007425 | | ATP-binding cassette domain-containing protein | low | > 86 |
| Xanthobacter sp. DMC5 | 0.33 | GFF1481 | | Multidrug resistance protein MdtE | 0.49 | GFF799 | | Vitamin B12 import ATP-binding protein BtuD | — | — |
| Bosea sp. OAE506 | 0.30 | ABIE41_RS18645 | | efflux RND transporter periplasmic adaptor subunit | 0.45 | ABIE41_RS16375 | | oligopeptide/dipeptide ABC transporter ATP-binding protein | low | > 77 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS04610 | | hypothetical protein | 0.68 | AZOBR_RS21780 | | peptide ABC transporter ATP-binding protein | — | — |
| Pseudomonas segetis P6 | 0.26 | MPMX49_01633 | | Multidrug resistance protein MdtA | 0.87 | MPMX49_03890 | | putative D,D-dipeptide transport ATP-binding protein DdpF | low | > 75 |
| Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_1519 | | RND family efflux transporter, MFP subunit | 0.60 | EX28DRAFT_3800 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.25 | PagCFBP13505_RS12055 | | efflux RND transporter periplasmic adaptor subunit | 0.59 | PagCFBP13505_RS15665 | | ABC transporter ATP-binding protein | low | > 74 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS10855 | | RND family efflux transporter MFP subunit | 0.59 | BWI76_RS26865 | | dipeptide ABC transporter ATP-binding protein | low | > 92 |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS11370 | | RND transporter MFP subunit | 0.66 | BPHYT_RS18670 | | peptide ABC transporter ATP-binding protein | low | > 109 |
| Dickeya dadantii 3937 | 0.24 | DDA3937_RS04725 | | efflux RND transporter periplasmic adaptor subunit | 0.58 | DDA3937_RS00480 | | ABC transporter ATP-binding protein | low | > 74 |
| Pantoea sp. MT58 | 0.23 | IAI47_21720 | | efflux RND transporter periplasmic adaptor subunit | 0.59 | IAI47_18630 | | ABC transporter ATP-binding protein | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.23 | Ac3H11_932 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.48 | Ac3H11_2052 | | Putative glutathione transporter, ATP-binding component | low | > 79 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_05198 | | RND family efflux transporter, MFP subunit | 0.66 | H281DRAFT_05806 | | dipeptide transport system ATP-binding protein | low | > 103 |
| Sinorhizobium meliloti 1021 | 0.22 | SM_b20346 | | efflux protein | 0.48 | SMc00790 | | peptide ABC transporter ATP-binding protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.21 | ABIE53_002353 | | multidrug efflux system membrane fusion protein | 0.66 | ABIE53_000054 | | dipeptide transport system ATP-binding protein | low | > 113 |
| Variovorax sp. SCN45 | 0.19 | GFF494 | | RND efflux system, membrane fusion protein | 0.59 | GFF7287 | | Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 127 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.13 | DVU0058 | | efflux transporter, RND family, MFP subunit (TIGR) | 0.46 | DVU0165 | oppF | oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Dinoroseobacter shibae DFL-12 | 0.11 | Dshi_3902 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.45 | Dshi_0885 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | low | > 64 |
Not shown: 8 genomes with orthologs for Psyr_0344 only; 37 genomes with orthologs for Psyr_4242 only