Conservation of cofitness between Psyr_3888 and Psyr_4227 in Pseudomonas syringae pv. syringae B728a

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 1.0 Psyr_4227 Dihydrodipicolinate synthetase 0.31 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 1.00 Psyr_4227 Dihydrodipicolinate synthetase low > 86
Pseudomonas simiae WCS417 0.92 PS417_05655 endonuclease III 0.91 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS05740 endonuclease III 0.92 PFLU_RS04235 5-dehydro-4-deoxyglucarate dehydratase low > 109
Pseudomonas fluorescens SBW25 0.92 PFLU_RS05740 endonuclease III 0.92 PFLU_RS04235 5-dehydro-4-deoxyglucarate dehydratase low > 109
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_04085 endonuclease III 0.94 AO353_05305 5-dehydro-4-deoxyglucarate dehydratase low > 101
Pseudomonas putida KT2440 0.90 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.91 PP_3599 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 96
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.95 Pf1N1B4_1110 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_18345 endonuclease III 0.92 AO356_07185 5-dehydro-4-deoxyglucarate dehydratase low > 104
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.94 PfGW456L13_5045 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 0.92 Pf6N2E2_3299 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 103
Pseudomonas sp. RS175 0.90 PFR28_03349 Endonuclease III 0.91 PFR28_00142 putative 5-dehydro-4-deoxyglucarate dehydratase low > 88
Pseudomonas stutzeri RCH2 0.86 Psest_3118 endonuclease III 0.86 Psest_0374 5-dehydro-4-deoxyglucarate dehydratase low > 67
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS08070 endonuclease IV 0.78 HSERO_RS15785 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 78
Variovorax sp. SCN45 0.69 GFF418 Endonuclease III (EC 4.2.99.18) 0.72 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 127
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS24560 endonuclease III 0.73 QEN71_RS32490 5-dehydro-4-deoxyglucarate dehydratase low > 153
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) 0.48 Xcc-8004.1211.1 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 74
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.71 Ac3H11_336 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 79
Ralstonia solanacearum PSI07 0.68 RPSI07_RS19265 endonuclease III 0.54 RPSI07_RS03465 5-dehydro-4-deoxyglucarate dehydratase low > 81
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS09915 endonuclease III 0.55 ABZR87_RS20340 5-dehydro-4-deoxyglucarate dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS05970 endonuclease III 0.75 RR42_RS29080 5-dehydro-4-deoxyglucarate dehydratase low > 128
Ralstonia solanacearum GMI1000 0.68 RS_RS04975 endonuclease III 0.54 RS_RS21070 5-dehydro-4-deoxyglucarate dehydratase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF4003 Endonuclease III (EC 4.2.99.18) 0.71 GFF792 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 90
Paraburkholderia graminis OAS925 0.68 ABIE53_001423 endonuclease-3 0.74 ABIE53_004431 5-dehydro-4-deoxyglucarate dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00293 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III 0.76 H281DRAFT_03816 5-dehydro-4-deoxyglucarate dehydratase low > 103
Ralstonia solanacearum UW163 0.67 UW163_RS11660 endonuclease III 0.54 UW163_RS19425 5-dehydro-4-deoxyglucarate dehydratase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS14195 endonuclease III 0.54 RALBFv3_RS19750 5-dehydro-4-deoxyglucarate dehydratase low > 76
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS06080 endonuclease IV 0.74 BPHYT_RS20415 5-dehydro-4-deoxyglucarate dehydratase low > 109
Variovorax sp. OAS795 0.66 ABID97_RS17315 endonuclease III 0.71 ABID97_RS10365 5-dehydro-4-deoxyglucarate dehydratase low > 91
Castellaniella sp019104865 MT123 0.65 ABCV34_RS08465 endonuclease III 0.68 ABCV34_RS14800 5-dehydro-4-deoxyglucarate dehydratase low > 48
Azospirillum sp. SherDot2 0.61 MPMX19_02500 Endonuclease III 0.66 MPMX19_02894 putative 5-dehydro-4-deoxyglucarate dehydratase low > 112
Bosea sp. OAE506 0.58 ABIE41_RS03410 endonuclease III 0.51 ABIE41_RS20665 5-dehydro-4-deoxyglucarate dehydratase low > 77

Not shown: 63 genomes with orthologs for Psyr_3888 only; 2 genomes with orthologs for Psyr_4227 only