Conservation of cofitness between Psyr_4287 and Psyr_4118 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4287 tRNA (uracil-5-)-methyltransferase 1.0 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal 0.41 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4287 tRNA (uracil-5-)-methyltransferase 1.00 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal low > 86
Pseudomonas putida KT2440 0.83 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.82 PP_1320 stringent starvation protein A 0.29 28
Pseudomonas simiae WCS417 0.83 PS417_24385 tRNA (uracil-5-)-methyltransferase 0.92 PS417_04170 stringent starvation protein A low > 88
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.90 Pf1N1B4_959 Stringent starvation protein A low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.91 Pf6N2E2_5340 Stringent starvation protein A low > 103
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_13905 tRNA (uracil-5-)-methyltransferase 0.92 AO353_15260 stringent starvation protein A low > 101
Pseudomonas sp. RS175 0.82 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.89 PFR28_03603 Stringent starvation protein A low > 88
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.90 PfGW456L13_1637 Stringent starvation protein A low > 87
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.91 PFLU_RS04210 stringent starvation protein A low > 109
Pseudomonas fluorescens SBW25 0.82 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.91 PFLU_RS04210 stringent starvation protein A 0.61 79
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_15600 tRNA (uracil-5-)-methyltransferase 0.91 AO356_17080 stringent starvation protein A low > 104
Pseudomonas sp. S08-1 0.80 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase 0.85 OH686_08375 Stringent starvation protein A low > 80
Pseudomonas stutzeri RCH2 0.79 Psest_3451 tRNA (uracil-5-)-methyltransferase 0.82 Psest_3276 Glutathione S-transferase — —
Dechlorosoma suillum PS 0.53 Dsui_2239 tRNA (uracil-5-)-methyltransferase 0.40 Dsui_1815 glutathione S-transferase — —
Acinetobacter radioresistens SK82 0.53 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.35 MPMX26_00591 Stringent starvation protein A low > 36
Shewanella oneidensis MR-1 0.51 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) 0.55 SO0611 sspA stringent starvation protein a (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.51 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) 0.55 Shew_0573 sspA stringent starvation protein A (RefSeq) — —
Pantoea sp. MT58 0.51 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 IAI47_17235 stringent starvation protein A 0.39 24
Serratia liquefaciens MT49 0.51 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.54 IAI46_22365 stringent starvation protein A low > 86
Rahnella sp. WP5 0.51 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.53 EX31_RS12500 stringent starvation protein A low > 89
Klebsiella michiganensis M5al 0.51 BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.54 BWI76_RS25335 stringent starvation protein A low > 92
Dickeya dadantii 3937 0.51 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.58 DDA3937_RS01645 stringent starvation protein A low > 74
Enterobacter sp. TBS_079 0.51 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.55 MPMX20_04133 Stringent starvation protein A low > 85
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 CSW01_03060 stringent starvation protein A — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.56 HER17_RS19935 stringent starvation protein A low > 75
Escherichia coli ECRC102 0.50 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 NIAGMN_15590 sspA stringent starvation protein A — —
Shewanella sp. ANA-3 0.50 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) 0.55 Shewana3_0604 sspA stringent starvation protein A (RefSeq) — —
Escherichia coli ECRC99 0.50 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 KEDOAH_10320 sspA stringent starvation protein A — —
Escherichia coli ECRC100 0.50 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 OKFHMN_17830 sspA stringent starvation protein A low > 80
Escherichia coli ECRC98 0.50 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 JDDGAC_21455 sspA stringent starvation protein A low > 86
Escherichia coli BW25113 0.50 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) 0.55 b3229 sspA stringent starvation protein A (NCBI) low > 76
Dickeya dianthicola 67-19 0.50 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.58 HGI48_RS01545 stringent starvation protein A low > 71
Escherichia coli ECRC62 0.50 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 BNILDI_01905 sspA stringent starvation protein A low > 75
Escherichia fergusonii Becca 0.50 EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.55 EFB2_00601 Stringent starvation protein A low > 86
Escherichia coli ECOR27 0.50 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 NOLOHH_09630 sspA stringent starvation protein A low > 75
Escherichia coli BL21 0.50 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase 0.55 ECD_03089 stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase-like protein low > 61
Escherichia coli Nissle 1917 0.50 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 ECOLIN_RS18520 stringent starvation protein SspA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.55 OHPLBJKB_00475 Stringent starvation protein A low > 73
Enterobacter asburiae PDN3 0.50 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase 0.55 EX28DRAFT_3278 Glutathione S-transferase low > 76
Escherichia coli ECOR38 0.50 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 HEPCGN_16705 sspA stringent starvation protein A low > 87
Escherichia coli ECRC101 0.50 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.55 MCAODC_08350 sspA stringent starvation protein A low > 87
Dickeya dianthicola ME23 0.50 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.58 DZA65_RS01615 stringent starvation protein A low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) 0.55 GFF2968 Stringent starvation protein A low > 78
Erwinia tracheiphila SCR3 0.49 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.54 LU632_RS21330 sspA stringent starvation protein A — —
Shewanella amazonensis SB2B 0.48 Sama_0193 tRNA (uracil-5-)-methyltransferase (RefSeq) 0.54 Sama_3018 sspA stringent starvation protein A (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.47 MIT1002_03370 tRNA (uracil(54)-C(5))-methyltransferase 0.51 MIT1002_00817 Stringent starvation protein A — —

Not shown: 0 genomes with orthologs for Psyr_4287 only; 24 genomes with orthologs for Psyr_4118 only