Conservation of cofitness between Psyr_3347 and Psyr_3636 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3347 transcriptional regulator, TetR family 1.0 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.47 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3347 transcriptional regulator, TetR family 1.00 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Dickeya dianthicola 67-19 0.48 HGI48_RS10740 TetR/AcrR family transcriptional regulator 0.40 HGI48_RS03510 polysaccharide biosynthesis protein 0.65 38
Dickeya dadantii 3937 0.46 DDA3937_RS10775 TetR/AcrR family transcriptional regulator 0.40 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS06805 transcriptional regulator 0.45 HSERO_RS21110 dTDP-glucose 4,6-dehydratase low > 78
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS18275 TetR/AcrR family transcriptional regulator 0.29 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase low > 74
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS01945 TetR/AcrR family transcriptional regulator 0.37 RALBFv3_RS19155 polysaccharide biosynthesis protein low > 76
Ralstonia solanacearum UW163 0.34 UW163_RS15255 TetR/AcrR family transcriptional regulator 0.37 UW163_RS19975 polysaccharide biosynthesis protein
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_07060 TetR/AcrR family transcriptional regulator 0.40 CSW01_01350 polysaccharide biosynthesis protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.1792.1 Transcription regulator of multidrug efflux pump operon, TetR (AcrR) family 0.25 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 74
Rhodopseudomonas palustris CGA009 0.29 TX73_010135 TetR/AcrR family transcriptional regulator 0.21 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase low > 86
Ralstonia solanacearum GMI1000 0.28 RS_RS21015 TetR/AcrR family transcriptional regulator 0.37 RS_RS21965 polysaccharide biosynthesis protein low > 80
Ralstonia solanacearum PSI07 0.27 RPSI07_RS03375 TetR/AcrR family transcriptional regulator 0.37 RPSI07_RS04445 polysaccharide biosynthesis protein low > 81
Magnetospirillum magneticum AMB-1 0.25 AMB_RS21070 TetR family transcriptional regulator 0.26 AMB_RS00500 polysaccharide biosynthesis protein
Pseudomonas putida KT2440 0.22 PP_1515 Transcriptional regulator, tetR family 0.78 PP_1805 Polysaccharide biosynthesis protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_06140 TetR family transcriptional regulator 0.83 AO356_03345 hypothetical protein low > 104
Pseudomonas sp. S08-1 0.22 OH686_06750 Transcriptional regulator, AcrR family 0.71 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Azospirillum sp. SherDot2 0.22 MPMX19_04289 hypothetical protein 0.24 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Bosea sp. OAE506 0.21 ABIE41_RS08455 TetR/AcrR family transcriptional regulator 0.17 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase
Lysobacter sp. OAE881 0.20 ABIE51_RS10665 TetR/AcrR family transcriptional regulator 0.26 ABIE51_RS09370 nucleoside-diphosphate sugar epimerase/dehydratase low > 62
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_16355 TetR family transcriptional regulator 0.83 AO353_01970 hypothetical protein low > 101
Pseudomonas sp. RS175 0.20 PFR28_00377 hypothetical protein 0.84 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_4732 Transcriptional regulator, TetR family 0.86 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Shewanella amazonensis SB2B 0.19 Sama_2341 TetR family transcriptional regulator (RefSeq) 0.46 Sama_2244 polysaccharide biosynthesis protein (RefSeq) 0.37 27
Pseudomonas stutzeri RCH2 0.19 Psest_1564 Transcriptional regulator 0.74 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_3093 Transcriptional regulator, TetR family 0.83 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas simiae WCS417 0.18 PS417_06105 TetR family transcriptional regulator 0.79 PS417_08190 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.18 PFLU_RS06175 TetR/AcrR family transcriptional regulator 0.84 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS06175 TetR/AcrR family transcriptional regulator 0.84 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_3939 transcriptional regulator, TetR family 0.23 Ga0059261_4092 Predicted nucleoside-diphosphate sugar epimerases low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5760 Transcriptional regulator, TetR family 0.45 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 90
Acinetobacter radioresistens SK82 0.15 MPMX26_01288 hypothetical protein 0.35 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36
Sinorhizobium meliloti 1021 0.15 SMc03169 transcriptional regulator 0.21 SM_b21232 nucleotide sugar epimerase dehydratase
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS21330 TetR family transcriptional regulator 0.25 CA265_RS19185 polysaccharide biosynthesis protein low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_07370 TetR family transcriptional regulator 0.24 CA264_12325 polysaccharide biosynthesis protein low > 74

Not shown: 15 genomes with orthologs for Psyr_3347 only; 23 genomes with orthologs for Psyr_3636 only