Conservation of cofitness between Psyr_1085 and Psyr_1733 in Pseudomonas syringae pv. syringae B728a

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase 1.0 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.33 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase 1.00 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas sp. RS175 0.78 PFR28_03532 Ribosomal RNA large subunit methyltransferase F 0.94 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5416 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.95 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_17450 23S rRNA methyltransferase 0.94 AO356_01015 peptidylprolyl isomerase low > 104
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_903 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.92 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_04555 23S rRNA methyltransferase 0.90 AO353_27825 peptidylprolyl isomerase low > 101
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_1710 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.89 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas fluorescens SBW25 0.71 PFLU_RS05215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.90 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS05215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.90 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas simiae WCS417 0.70 PS417_05145 23S rRNA methyltransferase 0.89 PS417_16900 peptidylprolyl isomerase — —
Pseudomonas putida KT2440 0.69 PP_0976 Ribosomal RNA large subunit methyltransferase F 0.78 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.11 91
Pseudomonas sp. S08-1 0.68 OH686_17875 23S rRNA (adenine(1618)-N(6))-methyltransferase 0.73 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB low > 80
Pseudomonas stutzeri RCH2 0.66 Psest_1227 Predicted SAM-dependent methyltransferase 0.73 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 67
Erwinia tracheiphila SCR3 0.54 LU632_RS09435 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.62 LU632_RS15235 ppiB peptidylprolyl isomerase B — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS17915 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.60 HER17_RS06485 peptidylprolyl isomerase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF702 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.64 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Serratia liquefaciens MT49 0.52 IAI46_07510 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.60 IAI46_05385 peptidylprolyl isomerase B low > 86
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2183 Predicted SAM-dependent methyltransferase 0.62 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family — —
Enterobacter sp. TBS_079 0.51 MPMX20_01436 Ribosomal RNA large subunit methyltransferase F 0.62 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B low > 85
Escherichia coli ECOR38 0.51 HEPCGN_01810 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 HEPCGN_06465 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC98 0.51 JDDGAC_09865 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 JDDGAC_11475 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR27 0.51 NOLOHH_22580 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 NOLOHH_00815 ppiB peptidylprolyl isomerase B — —
Escherichia coli Nissle 1917 0.51 ECOLIN_RS04295 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 ECOLIN_RS03045 peptidylprolyl isomerase B — —
Escherichia coli ECRC99 0.51 KEDOAH_21680 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 KEDOAH_20145 ppiB peptidylprolyl isomerase B — —
Escherichia coli BW25113 0.50 b0807 ybiN orf, hypothetical protein (VIMSS) 0.64 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02906 Ribosomal RNA large subunit methyltransferase F 0.64 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia fergusonii Becca 0.50 EFB2_03298 Ribosomal RNA large subunit methyltransferase F 0.64 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli ECRC62 0.50 BNILDI_20860 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 BNILDI_22245 ppiB peptidylprolyl isomerase B — —
Escherichia coli BL21 0.50 ECD_00774 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 0.64 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) — —
Escherichia coli ECRC100 0.50 OKFHMN_06230 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 OKFHMN_07825 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC102 0.50 NIAGMN_04275 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 NIAGMN_05880 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC101 0.50 MCAODC_25445 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.64 MCAODC_27045 ppiB peptidylprolyl isomerase B — —
Klebsiella michiganensis M5al 0.50 BWI76_RS08955 23S rRNA (adenine(1618)-N(6))-methyltransferase 0.63 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase — —
Rahnella sp. WP5 0.49 EX31_RS18995 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.62 EX31_RS22640 peptidylprolyl isomerase B — —
Dechlorosoma suillum PS 0.48 Dsui_3226 putative SAM-dependent methyltransferase 0.67 Dsui_3088 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 51
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_08115 ribosomal RNA large subunit methyltransferase F 0.59 CSW01_09260 peptidylprolyl isomerase low > 62
Pantoea sp. MT58 0.46 IAI47_13215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.63 IAI47_14340 peptidylprolyl isomerase B — —
Shewanella loihica PV-4 0.46 Shew_3741 putative SAM-dependent methyltransferase (RefSeq) 0.57 Shew_2512 peptidylprolyl isomerase (RefSeq) — —
Shewanella sp. ANA-3 0.46 Shewana3_0127 putative SAM-dependent methyltransferase (RefSeq) 0.60 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) — —
Shewanella amazonensis SB2B 0.43 Sama_3621 putative SAM-dependent methyltransferase (RefSeq) 0.57 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) — —
Shewanella oneidensis MR-1 0.42 SO_0134 putative SAM-dependent methyltransferase (RefSeq) 0.60 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.41 MIT1002_02912 Ribosomal RNA large subunit methyltransferase F 0.63 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B low > 70

Not shown: 5 genomes with orthologs for Psyr_1085 only; 28 genomes with orthologs for Psyr_1733 only