Conservation of cofitness between Psyr_3831 and Psyr_0259 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3831 ATP-dependent helicase HrpA 1.0 Psyr_0259 Osmolarity sensor protein envZ 0.39 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3831 ATP-dependent helicase HrpA 1.00 Psyr_0259 Osmolarity sensor protein envZ — —
Pseudomonas simiae WCS417 0.89 PS417_20575 ATP-dependent helicase HrpA 0.85 PS417_01175 ATPase — —
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.85 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.85 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.88 Pf1N1B4_1773 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.88 Pf6N2E2_3904 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_18225 ATP-dependent RNA helicase HrpA 0.89 AO353_11750 ATPase low > 101
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04280 ATP-dependent RNA helicase HrpA 0.88 AO356_10165 ATPase low > 104
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.86 PfGW456L13_426 Osmolarity sensory histidine kinase EnvZ low > 87
Pseudomonas sp. RS175 0.88 PFR28_00739 hypothetical protein 0.88 PFR28_04869 Osmolarity sensor protein EnvZ low > 88
Pseudomonas putida KT2440 0.83 PP_4546 ATP-dependent helicase HrpA 0.85 PP_0247 Osmolarity sensor protein EnvZ 0.31 61
Pseudomonas stutzeri RCH2 0.80 Psest_1339 ATP-dependent helicase HrpA 0.75 Psest_3994 Signal transduction histidine kinase low > 67
Pseudomonas sp. S08-1 0.80 OH686_05730 RNA helicase HrpA 0.79 OH686_11090 Osmolarity sensory histidine kinase EnvZ low > 80
Serratia liquefaciens MT49 0.47 IAI46_13330 ATP-dependent RNA helicase HrpA 0.24 IAI46_23785 two-component system sensor histidine kinase EnvZ low > 86
Shewanella amazonensis SB2B 0.47 Sama_1619 ATP-dependent helicase HrpA (RefSeq) 0.25 Sama_3511 envZ osmolarity sensor protein (RefSeq) 0.23 12
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.24 GFF614 Osmolarity sensory histidine kinase EnvZ low > 78
Shewanella sp. ANA-3 0.47 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) 0.27 Shewana3_4018 envZ osmolarity sensor protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) 0.27 SO4634 envZ osmolarity sensor protein EnvZ (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.47 HER17_RS09660 ATP-dependent RNA helicase HrpA 0.23 HER17_RS01705 two-component system sensor histidine kinase EnvZ low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS12270 ATP-dependent RNA helicase HrpA 0.25 DDA3937_RS19615 two-component system sensor histidine kinase EnvZ low > 74
Rahnella sp. WP5 0.47 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.24 EX31_RS04795 two-component system sensor histidine kinase EnvZ low > 89
Dickeya dianthicola ME23 0.46 DZA65_RS12800 ATP-dependent RNA helicase HrpA 0.24 DZA65_RS20835 two-component system sensor histidine kinase EnvZ low > 75
Dickeya dianthicola 67-19 0.46 HGI48_RS12360 ATP-dependent RNA helicase HrpA 0.25 HGI48_RS19745 two-component system sensor histidine kinase EnvZ low > 71
Escherichia fergusonii Becca 0.46 EFB2_02565 hypothetical protein 0.24 EFB2_00424 Osmolarity sensor protein EnvZ low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA 0.24 ECOLIN_RS19450 two-component system sensor histidine kinase EnvZ — —
Pantoea sp. MT58 0.46 IAI47_09520 ATP-dependent RNA helicase HrpA 0.25 IAI47_01825 two-component system sensor histidine kinase EnvZ low > 76
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1357 RNA helicase HrpA 0.23 EX28DRAFT_4139 Signal transduction histidine kinase low > 76
Escherichia coli BL21 0.46 ECD_01368 putative ATP-dependent helicase 0.24 ECD_03256 sensory histidine kinase in two-component regulatory system with OmpR 0.40 18
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02301 hypothetical protein 0.24 OHPLBJKB_00299 Osmolarity sensor protein EnvZ 0.83 5
Escherichia coli ECRC100 0.46 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.24 OKFHMN_17040 envZ two-component system sensor histidine kinase EnvZ low > 80
Escherichia coli ECRC101 0.46 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.24 MCAODC_07570 envZ two-component system sensor histidine kinase EnvZ low > 87
Enterobacter sp. TBS_079 0.46 MPMX20_02189 hypothetical protein 0.23 MPMX20_04291 Osmolarity sensor protein EnvZ low > 85
Escherichia coli ECRC98 0.46 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA 0.24 JDDGAC_20670 envZ two-component system sensor histidine kinase EnvZ low > 86
Klebsiella michiganensis M5al 0.46 BWI76_RS13165 ATP-dependent RNA helicase HrpA 0.25 BWI76_RS26670 two-component sensor histidine kinase low > 92
Escherichia coli ECRC102 0.46 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.24 NIAGMN_14810 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC62 0.46 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA 0.24 BNILDI_02690 envZ two-component system sensor histidine kinase EnvZ 0.47 55
Escherichia coli ECRC99 0.46 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA 0.24 KEDOAH_11100 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECOR27 0.46 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA 0.24 NOLOHH_08830 envZ two-component system sensor histidine kinase EnvZ low > 75
Escherichia coli ECOR38 0.46 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA 0.24 HEPCGN_15850 envZ two-component system sensor histidine kinase EnvZ low > 87
Escherichia coli BW25113 0.46 b1413 hrpA ATP-dependent helicase (RefSeq) 0.24 b3404 envZ osmolarity sensor protein (NCBI) low > 76
Erwinia tracheiphila SCR3 0.45 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA 0.22 LU632_RS22935 envZ two-component system sensor histidine kinase EnvZ low > 74
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12980 ATP-dependent helicase 0.22 BPHYT_RS28995 histidine kinase low > 109
Paraburkholderia graminis OAS925 0.39 ABIE53_002813 ATP-dependent helicase HrpA 0.23 ABIE53_004378 two-component system osmolarity sensor histidine kinase EnvZ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00445 ATP-dependent helicase HrpA 0.19 H281DRAFT_01391 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ low > 103
Acinetobacter radioresistens SK82 0.37 MPMX26_02008 hypothetical protein 0.29 MPMX26_02839 Osmolarity sensor protein EnvZ low > 36
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS05625 ATP-dependent RNA helicase HrpA 0.20 QEN71_RS25990 ATP-binding protein low > 153

Not shown: 21 genomes with orthologs for Psyr_3831 only; 0 genomes with orthologs for Psyr_0259 only