| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_4435 | | Regulator of sigma D | 1.0 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | 0.29 | 18 |
| Pseudomonas sp. RS175 | 0.99 | PFR28_04361 | | Regulator of sigma D | 0.93 | PFR28_05090 | | Outer membrane protein TolC | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_12810 | | transcriptional regulator | 0.99 | AO356_08815 | | channel protein TolC | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_2190 | | Regulator of sigma D | 0.94 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_861 | | Regulator of sigma D | 0.84 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_08965 | | transcriptional regulator | 0.89 | AO353_13005 | | channel protein TolC | low | > 101 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_27505 | | transcriptional regulator | 0.88 | PS417_02350 | | channel protein TolC | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | 0.88 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | 0.88 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 0.82 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 0.82 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas sp. S08-1 | 0.70 | OH686_13925 | | Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD | 0.74 | OH686_15890 | | Outer membrane channel TolC (OpmH) | 0.75 | 80 |
| Pseudomonas stutzeri RCH2 | 0.65 | Psest_3743 | | Regulator of sigma D | 0.73 | Psest_0476 | | type I secretion outer membrane protein, TolC family | low | > 67 |
| Pseudomonas putida KT2440 | 0.64 | PP_0191 | | Transcriptional regulatory protein AlgQ | 0.83 | PP_4923 | | Outer membrane efflux protein | low | > 96 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_221 | | anti-RNA polymerase sigma 70 factor | 0.33 | HP15_451 | | type I secretion outer membrane protein, TolC family | — | — |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_0434 | | anti-RNA polymerase sigma 70 factor (RefSeq) | 0.24 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.32 | Sama_0386 | | anti-RNA polymerase sigma 70 factor (RefSeq) | 0.22 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.31 | Shew_3423 | | anti-RNA polymerase sigma 70 factor (RefSeq) | 0.24 | Shew_0544 | tolC | outer membrane channel protein (RefSeq) | low | > 60 |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS01560 | | Rsd/AlgQ family anti-sigma factor | 0.23 | BWI76_RS24400 | | outer membrane channel protein TolC | low | > 92 |
| Shewanella oneidensis MR-1 | 0.30 | SO0433 | rsd | regulator of sigma D (NCBI ptt file) | 0.24 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.30 | MIT1002_03798 | | Regulator of sigma D | 0.25 | MIT1002_00670 | | Outer membrane protein TolC precursor | low | > 70 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_01325 | | Rsd/AlgQ family anti-sigma factor | 0.22 | IAI46_21945 | | outer membrane channel protein TolC | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.27 | GFF4197 | | Regulator of sigma D | 0.23 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | low | > 78 |
| Pantoea sp. MT58 | 0.27 | IAI47_18080 | | Rsd/AlgQ family anti-sigma factor | 0.23 | IAI47_03135 | | outer membrane channel protein TolC | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS20375 | | Rsd/AlgQ family anti-sigma factor | 0.24 | HER17_RS19825 | | outer membrane channel protein TolC | low | > 75 |
| Enterobacter sp. TBS_079 | 0.26 | MPMX20_00218 | | Regulator of sigma D | 0.24 | MPMX20_03882 | | Outer membrane protein TolC | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.26 | CSW01_01710 | | Rsd/AlgQ family anti-sigma factor | 0.27 | CSW01_12335 | | outer membrane protein TolC | low | > 62 |
| Rahnella sp. WP5 | 0.25 | EX31_RS16820 | | Rsd/AlgQ family anti-sigma factor | 0.25 | EX31_RS08100 | | outer membrane channel protein TolC | low | > 89 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_12005 | rsd | sigma D regulator | 0.24 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli BW25113 | 0.25 | b3995 | rsd | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | 0.24 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.21 | 74 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_04055 | | Regulator of sigma D | 0.24 | OHPLBJKB_00668 | | Outer membrane protein TolC | low | > 73 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_16995 | rsd | sigma D regulator | 0.24 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | low | > 86 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_13370 | rsd | sigma D regulator | 0.24 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | low | > 80 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_11120 | rsd | sigma D regulator | 0.24 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli BL21 | 0.25 | ECD_03872 | | stationary phase protein, binds sigma 70 RNA polymerase subunit | 0.24 | ECD_02907 | | transport channel | low | > 61 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_05515 | rsd | sigma D regulator | 0.24 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | low | > 75 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_4537 | | Regulator of sigma D | 0.23 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | low | > 76 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_03870 | rsd | sigma D regulator | 0.24 | MCAODC_09320 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_06010 | rsd | sigma D regulator | 0.24 | BNILDI_00905 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_14790 | rsd | sigma D regulator | 0.24 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia fergusonii Becca | 0.24 | EFB2_04616 | | Regulator of sigma D | 0.24 | EFB2_00773 | | Outer membrane protein TolC | low | > 86 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS23045 | | sigma D regulator | 0.24 | ECOLIN_RS17515 | | outer membrane channel protein TolC | low | > 55 |
| Erwinia tracheiphila SCR3 | 0.22 | LU632_RS00975 | | Rsd/AlgQ family anti-sigma factor | 0.23 | LU632_RS20635 | tolC | outer membrane channel protein TolC | — | — |
| Dickeya dianthicola 67-19 | 0.20 | HGI48_RS01175 | | sigma D regulator | 0.25 | HGI48_RS01635 | | outer membrane channel protein TolC | low | > 71 |
| Dickeya dadantii 3937 | 0.20 | DDA3937_RS01180 | | Rsd/AlgQ family anti-sigma factor | 0.26 | DDA3937_RS01740 | | outer membrane channel protein TolC | low | > 74 |
| Dickeya dianthicola ME23 | 0.20 | DZA65_RS01220 | | Rsd/AlgQ family anti-sigma factor | 0.25 | DZA65_RS01710 | | outer membrane channel protein TolC | low | > 75 |
Not shown: 0 genomes with orthologs for Pf6N2E2_4435 only; 32 genomes with orthologs for Pf6N2E2_3645 only