Conservation of cofitness between Pf6N2E2_784 and Pf6N2E2_3192 in Pseudomonas fluorescens FW300-N2E2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_784 Outer membrane usher protein FIMD 1.0 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase 0.31 3
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_2037 Fimbrial biogenesis outer membrane usher protein 0.74 Psyr_1234 RNA methyltransferase TrmH, group 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_2037 Fimbrial biogenesis outer membrane usher protein 0.74 Psyr_1234 RNA methyltransferase TrmH, group 1 low > 86
Pseudomonas putida KT2440 0.53 PP_1889 Type 1 pili subunit FimD 0.74 PP_0839 tRNA Cm32/Um32 methyltransferase low > 96
Serratia liquefaciens MT49 0.28 IAI46_07750 fimbrial biogenesis outer membrane usher protein 0.51 IAI46_19365 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 86
Escherichia coli ECOR27 0.28 NOLOHH_08010 lpfC outer membrane usher protein LpfC 0.53 NOLOHH_13280 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 75
Klebsiella michiganensis M5al 0.27 BWI76_RS20110 fimbrial assembly protein 0.52 BWI76_RS21170 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 92
Escherichia coli ECRC62 0.27 BNILDI_04525 fimD fimbrial protein 0.53 BNILDI_12080 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 75
Escherichia coli Nissle 1917 0.26 ECOLIN_RS24780 fimbrial usher FimD 0.53 ECOLIN_RS14375 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ — —
Escherichia coli ECOR38 0.26 HEPCGN_09605 fimD fimbrial usher FimD 0.53 HEPCGN_20750 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03750 Outer membrane usher protein FimD 0.53 OHPLBJKB_01177 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 low > 73
Escherichia coli BL21 0.26 ECD_04186 fimbrial usher outer membrane porin protein; FimCD chaperone-usher 0.53 ECD_02424 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF467 type 1 fimbriae anchoring protein FimD 0.53 GFF2437 tRNA:Cm32/Um32 methyltransferase low > 78
Escherichia coli ECRC101 0.26 MCAODC_02105 fimD fimbrial usher FimD 0.53 MCAODC_12140 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 87
Escherichia coli ECRC100 0.26 OKFHMN_11590 fimD fimbrial usher FimD 0.53 OKFHMN_21610 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 80
Escherichia coli ECRC102 0.26 NIAGMN_09440 fimD fimbrial usher FimD 0.53 NIAGMN_19380 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ — —
Escherichia coli ECRC99 0.26 KEDOAH_16555 fimD fimbrial usher FimD 0.53 KEDOAH_06610 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ — —
Enterobacter asburiae PDN3 0.26 EX28DRAFT_2190 P pilus assembly protein, porin PapC 0.53 EX28DRAFT_0107 RNA methyltransferase, TrmH family, group 1 low > 76
Escherichia fergusonii Becca 0.26 EFB2_04127 Outer membrane usher protein FimD 0.53 EFB2_01358 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ low > 86
Escherichia coli BW25113 0.26 b4317 fimD outer membrane usher protein, type 1 fimbrial synthesis (NCBI) 0.53 b2532 yfhQ predicted methyltransferase (NCBI) low > 76
Pantoea sp. MT58 0.26 IAI47_07315 fimbrial biogenesis usher protein 0.51 IAI47_04995 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 76
Escherichia coli ECRC98 0.26 JDDGAC_15185 fimD fimbrial usher FimD 0.53 JDDGAC_25285 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 86
Enterobacter sp. TBS_079 0.26 MPMX20_01111 Outer membrane usher protein SfmD 0.53 MPMX20_03413 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ low > 85
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_18145 fimbrial protein 0.94 AO353_15820 RNA methyltransferase low > 101
Lysobacter sp. OAE881 0.25 ABIE51_RS19045 fimbria/pilus outer membrane usher protein 0.43 ABIE51_RS14985 RNA methyltransferase low > 62
Pseudomonas simiae WCS417 0.25 PS417_16960 fimbrial protein 0.91 PS417_23215 RNA methyltransferase low > 88
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS05770 fimbria/pilus outer membrane usher protein 0.37 ABZR86_RS19895 RNA methyltransferase low > 74
Pseudomonas sp. RS175 0.25 PFR28_01492 Outer membrane usher protein SfmD 0.96 PFR28_00283 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 low > 88
Rahnella sp. WP5 0.25 EX31_RS04815 fimbrial biogenesis outer membrane usher protein 0.50 EX31_RS20555 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 89
Erwinia tracheiphila SCR3 0.24 LU632_RS20300 fimbrial biogenesis outer membrane usher protein 0.50 LU632_RS17880 trmJ tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 74
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS09390 fimbria/pilus outer membrane usher protein 0.34 ABZR87_RS10615 RNA methyltransferase low > 80
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS34285 fimbrial biogenesis outer membrane usher protein 0.39 BPHYT_RS12460 RNA methyltransferase low > 109
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_16640 Outer membrane usher protein 0.40 OKGIIK_02340 trmJ RNA methyltransferase low > 52
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS17185 fimbria/pilus outer membrane usher protein 0.40 QEN71_RS06100 RNA methyltransferase low > 153
Paraburkholderia graminis OAS925 0.21 ABIE53_001303 outer membrane usher protein 0.41 ABIE53_002713 tRNA/rRNA methyltransferase low > 113
Pseudomonas fluorescens SBW25 0.20 PFLU_RS07925 fimbrial biogenesis outer membrane usher protein 0.91 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS07925 fimbrial biogenesis outer membrane usher protein 0.91 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pectobacterium carotovorum WPP14 0.14 HER17_RS16925 fimbria/pilus outer membrane usher protein 0.49 HER17_RS06005 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 75
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_2137 Beta-fimbriae usher protein 0.93 Pf1N1B4_868 tRNA:Cm32/Um32 methyltransferase low > 87
Rhodanobacter denitrificans FW104-10B01 0.04 LRK54_RS06995 fimbria/pilus outer membrane usher protein 0.38 LRK54_RS12970 RNA methyltransferase low > 59
Rhodanobacter denitrificans MT42 0.04 LRK55_RS06735 fimbria/pilus outer membrane usher protein 0.40 LRK55_RS12670 RNA methyltransferase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.04 Xcc-8004.3547.1 Sigma-fimbriae usher protein 0.37 Xcc-8004.2282.1 tRNA:Cm32/Um32 methyltransferase low > 74

Not shown: 1 genomes with orthologs for Pf6N2E2_784 only; 47 genomes with orthologs for Pf6N2E2_3192 only