Conservation of cofitness between Pf1N1B4_826 and Pf1N1B4_3720 in Pseudomonas fluorescens FW300-N1B4

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_826 tRNA (5-methoxyuridine) 34 synthase 1.0 Pf1N1B4_3720 Long-chain fatty acid transport protein 0.30 8
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4812 tRNA (5-methoxyuridine) 34 synthase 0.88 PfGW456L13_4229 Long-chain fatty acid transport protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_16015 tRNA (mo5U34)-methyltransferase 0.71 AO353_02580 Long-chain fatty acid transport protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3158 tRNA (5-methoxyuridine) 34 synthase 0.77 Pf6N2E2_5754 Long-chain fatty acid transport protein low > 103
Pseudomonas simiae WCS417 0.94 PS417_05220 tRNA methyltransferase 0.66 PS417_19995 Long-chain fatty acid transport protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_06450 tRNA (mo5U34)-methyltransferase 0.76 AO356_19200 Long-chain fatty acid transport protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS05290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.68 PFLU_RS21965 transporter 0.30 56
Pseudomonas fluorescens SBW25 0.93 PFLU_RS05290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.68 PFLU_RS21965 transporter low > 109
Pseudomonas sp. RS175 0.92 PFR28_00318 tRNA U34 carboxymethyltransferase 0.76 PFR28_03194 Long-chain fatty acid transport protein low > 88
Pseudomonas putida KT2440 0.87 PP_1440 tRNA (mo5U34)-methyltransferase 0.68 PP_1689 putative Long-chain fatty acid transporter low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_3947 Methyltransferase, putative 0.70 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_3947 Methyltransferase, putative 0.70 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas stutzeri RCH2 0.80 Psest_3085 methyltransferase, putative 0.61 Psest_2997 Long-chain fatty acid transport protein low > 67
Pseudomonas sp. S08-1 0.76 OH686_05375 tRNA (mo5U34)-methyltransferase 0.56 OH686_04915 Long-chain fatty acid transport protein low > 80
Klebsiella michiganensis M5al 0.56 BWI76_RS18195 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.20 BWI76_RS20470 long-chain fatty acid transporter low > 92
Escherichia coli ECRC98 0.56 JDDGAC_00795 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 JDDGAC_26505 fadL long-chain fatty acid transporter FadL low > 86
Escherichia coli ECRC100 0.56 OKFHMN_26220 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 OKFHMN_22545 fadL long-chain fatty acid transporter FadL low > 80
Escherichia coli ECRC101 0.56 MCAODC_19185 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 MCAODC_13575 fadL long-chain fatty acid transporter FadL low > 87
Escherichia coli ECRC99 0.56 KEDOAH_01885 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 KEDOAH_05650 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC62 0.56 BNILDI_15455 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 BNILDI_13095 fadL long-chain fatty acid transporter FadL low > 75
Escherichia coli ECRC102 0.56 NIAGMN_01840 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 NIAGMN_20320 fadL long-chain fatty acid transporter FadL — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01857 tRNA U34 carboxymethyltransferase 0.21 OHPLBJKB_01362 Long-chain fatty acid transport protein low > 73
Escherichia coli ECOR38 0.55 HEPCGN_04630 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 HEPCGN_21740 fadL long-chain fatty acid transporter FadL low > 87
Enterobacter sp. TBS_079 0.55 MPMX20_02776 tRNA U34 carboxymethyltransferase 0.22 MPMX20_03271 Long-chain fatty acid transport protein low > 85
Escherichia coli BL21 0.55 ECD_01842 tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 0.21 ECD_02268 long-chain fatty acid outer membrane transporter low > 61
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0686 tRNA (mo5U34)-methyltransferase 0.22 EX28DRAFT_0268 Long-chain fatty acid transport protein low > 76
Escherichia coli ECOR27 0.55 NOLOHH_16665 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 NOLOHH_14180 fadL long-chain fatty acid transporter FadL low > 75
Escherichia coli BW25113 0.55 b1871 yecP predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.21 b2344 fadL long-chain fatty acid outer membrane transporter (RefSeq) low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS13460 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.20 LU632_RS07305 fadL long-chain fatty acid transporter FadL low > 74
Escherichia coli Nissle 1917 0.55 ECOLIN_RS10700 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.24 ECOLIN_RS13565 long-chain fatty acid transporter FadL — —
Escherichia fergusonii Becca 0.55 EFB2_02071 tRNA U34 carboxymethyltransferase 0.24 EFB2_01515 Long-chain fatty acid transport protein low > 86
Dickeya dadantii 3937 0.55 DDA3937_RS10035 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.22 DDA3937_RS14615 long-chain fatty acid transporter FadL low > 74
Pantoea sp. MT58 0.55 IAI47_08405 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 IAI47_06115 long-chain fatty acid transporter FadL low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF1652 tRNA (5-methoxyuridine) 34 synthase 0.21 GFF1957 Long-chain fatty acid transport protein low > 78
Dickeya dianthicola 67-19 0.55 HGI48_RS10065 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.22 HGI48_RS14565 long-chain fatty acid transporter FadL low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS10475 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.22 DZA65_RS15505 long-chain fatty acid transporter FadL low > 75
Shewanella oneidensis MR-1 0.54 SO2436 methyltransferase, putative (NCBI ptt file) 0.23 SO4232 long-chain fatty acid transport protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_1950 putative methyltransferase (RefSeq) 0.24 Shewana3_3757 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 73
Serratia liquefaciens MT49 0.53 IAI46_14675 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.23 IAI46_18060 long-chain fatty acid transporter FadL low > 86
Rahnella sp. WP5 0.53 EX31_RS17290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.22 EX31_RS19720 long-chain fatty acid transporter FadL low > 89
Marinobacter adhaerens HP15 0.53 HP15_2493 methyltransferase 0.20 HP15_291 membrane protein involved in aromatic hydrocarbon degradation low > 73
Alteromonas macleodii MIT1002 0.53 MIT1002_02226 tRNA (mo5U34)-methyltransferase 0.24 MIT1002_03890 Outer membrane flp protein low > 70
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_05895 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 CSW01_18440 long-chain fatty acid transporter low > 62
Shewanella amazonensis SB2B 0.52 Sama_1846 methyltransferase, putative (RefSeq) 0.23 Sama_0339 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 62
Shewanella loihica PV-4 0.52 Shew_2082 putative methyltransferase (RefSeq) 0.21 Shew_3468 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.52 HER17_RS11890 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.21 HER17_RS06875 long-chain fatty acid transporter FadL low > 75

Not shown: 1 genomes with orthologs for Pf1N1B4_826 only; 21 genomes with orthologs for Pf1N1B4_3720 only